Ictalurus punctatus (channel catfish): 108271649
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Entry
108271649 CDS
T04658
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00250
Alanine, aspartate and glutamate metabolism
ipu00410
beta-Alanine metabolism
ipu00430
Taurine and hypotaurine metabolism
ipu00650
Butanoate metabolism
ipu01100
Metabolic pathways
Module
ipu_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
108271649 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
108271649 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
108271649 (gad1b)
00430 Taurine and hypotaurine metabolism
108271649 (gad1b)
Enzymes [BR:
ipu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
108271649 (gad1b)
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GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
108271649
NCBI-ProteinID:
XP_017334844
Ensembl:
ENSIPUG00000003555
UniProt:
A0A2D0RWG8
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Position
11:24674069..24714324
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AA seq
594 aa
AA seq
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MMMAASASSSSSSSAVEVDQSSANLRPPASACDGWYGVAHGCTRKLGMKICGFLQKNNSL
EEKGRMMGSFREKEQSHNRENREKETRFTRTETDFSNLFARDLLPAKNGEEPTMQFLLEV
MEILTNYVRKTFDRSTKVLDFHHPHQLLEGIEGFNLELCDQPESLEQILVDCRDTLKYGV
RTGHPRFFNQLSTGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREIVGWR
NGEGDGLFSPGGAISNMYSVMIARYKYFPEVKTKGMSAAPRLILFTSEHSHYSIAKAGAA
LGFGKENVILLSTDERGRVIPADLEAKIISAKQKGYVPLFVNATAGTTVYGAFDPINDIA
DICEKYNMWLHVDGAWGGSLLMSRKHRHKLNGVERANSVTWNPHKMMGVPLQCSAILVRE
KGILQGCNSMCAGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFEQHV
DRCLELSEYLYNKIKNREGYQMVMQGEPQHTNVCFWYIPPSLRNIPDGEERRERLHKVAP
KIKAMMMECGTTMVGYQPQGDKVNFFRMVISNHAATKSDIDFLIEEIERLGQDL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggcggcttcggcttcatcctcctcctcttcctcagccgtcgaagtggatcag
agctctgctaatctgcgacctccagcctcggcatgcgatggctggtacggggtcgcgcac
ggctgcacccgcaaactgggcatgaagatctgcgggtttctgcagaagaacaacagcttg
gaggagaaaggcaggatgatgggatccttcagagagaaagagcagagtcataacagggag
aatcgggagaaggaaacacgcttcacccgcaccgagactgacttctccaacctgttcgcc
cgggatttacttcctgctaaaaatggtgaagagccgactatgcagtttctcctcgaggtc
atggagatcctcaccaattacgtccgcaagaccttcgacagatccaccaaagttctggac
ttccaccatccacaccagctcctggagggcatcgagggcttcaacctggagctctgtgac
cagcctgagtcactcgagcagatcctcgtggactgcagggacacgctcaagtacggggtc
cgcacaggtcacccaagatttttcaatcagctctccactggcctggacatcatcggcctg
gctggagaatggttaacatccactgctaacactaacatgttcacctacgagattgcgcct
gtgtttgtgctgatggagcagctgacgctgaagaagatgagggagattgtcggctggcgt
aacggcgaaggagacggacttttctcaccgggtggtgctatatcaaacatgtacagtgtg
atgatcgcccgctataagtatttccccgaggtcaaaaccaaaggcatgtcggctgcaccg
cgcctcattctctttacatcagaacacagtcactattcgatcgccaaagctggagcggcc
ctgggtttcggtaaagaaaacgtcatcctgctcagtaccgatgaaaggggtcgggtcata
cctgcagacctggaggctaaaatcatcagcgccaaacagaagggttatgttccactcttt
gtgaacgcgacagccggtactacagtgtacggagcgtttgaccccatcaacgacatcgca
gacatctgcgagaaatacaacatgtggctccatgtggacggtgcatggggtggcagtctg
ctgatgtcaaggaagcatcgtcacaagctgaacggcgtcgagagagcgaactcggtcacg
tggaacccacacaagatgatgggagtgccactgcagtgttcagccatcctggtcagagag
aagggaattctgcagggctgtaactccatgtgtgcaggttacctgttccagcctgataaa
cagtacgatgtgacgtatgatacgggagataaagccatccagtgtggcagacacgtggac
atcttcaaattctggctcatgtggaaggccaagggaacagttggatttgagcagcatgtc
gaccggtgtctggagctctctgagtatctctacaacaagatcaagaatcgcgagggttac
cagatggtcatgcaaggagagccccagcacaccaacgtgtgtttctggtacattccaccc
agtttgaggaacatcccagacggagaggagagaagggaacgactgcacaaggtggcgcca
aagatcaaagcgatgatgatggagtgcggcaccaccatggtgggctaccagccgcaggga
gacaaagtcaatttcttccgcatggtcatctccaaccacgctgccaccaagtcggacatc
gacttcctcatcgaggagatcgagagactcggacaagacctgtga
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