Ictalurus punctatus (channel catfish): 108277825
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Entry
108277825 CDS
T04658
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ipu02000
]
108277825 (slc6a4a)
Transporters [BR:
ipu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
108277825 (slc6a4a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
108277825
NCBI-ProteinID:
XP_017346264
Ensembl:
ENSIPUG00000019593
UniProt:
A0A2D0SU96
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Position
17:13397510..13410078
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AA seq
642 aa
AA seq
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MEMKQAVMMNQEDQDEKGKSEENGRLVDGSIAEKGQKLVTGPTQVSNGYPSTSAQSPREG
TGALADKTSAPGAFRTLVVQQTSLDPPRETWSKKVDFLLSVIGYAVDLGNVWRFPYICYQ
NGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAICIIALY
IAFYYNTIMAWALYYLLSSFSTTLPWTTCKNSWNTANCKQYLSTDSNVTWTNESTSPAEE
FYTRKVLQVHLSPGLHQLGAVSWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTATLPYV
VLLILLVRGATLPGAWRGVVFYLKPNWEKLLSTTVWIDAAAQIFFSLGPGFGVLLAFASY
NPFHNNCYKDALVTSSVNCLTSFMSGFVIFTVLGYMAEMRKEGVETVAKDAGPSLLFIVY
AEAITNMPASTFLAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGLV
CVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDVHLMLG
FSPGLFWRVCWVAICPCFLLFIIGSFLAFPPEVRLFNYLYPFWTTVLGYCIGVSSFICVP
SYMVYHLLTTKGTFKQRLMKSITPEPANIEGLHRDIIITNAV
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacaggcagtgatgatgaaccaagaggaccaagacgagaagggcaaatct
gaagaaaatggcaggctggtggatggcagcattgctgagaaagggcagaaactagtcacg
gggcccacacaggtttcaaatgggtaccccagcacatcggctcagagcccaagggaaggc
accggggctttagcggacaagacaagtgctcctggggcattcaggacgcttgtggtccag
cagaccagtctggatccaccaagagagacatggagcaagaaggtggatttcctcctgtca
gtcattggctacgcagtggacctgggcaacgtgtggcgcttcccatacatctgctaccag
aatggaggaggagcgttcctgttgccctacctgctgatggcggtgtttggcggggttcct
ctgttctacatggagctggcgcttgggcagttccatcgcagtggctgcatatccatctgg
aaacacatttgccccatcttcaagggtattggctttgccatctgcattattgccctgtac
attgccttctactacaacaccatcatggcctgggctctgtattacctgttgtcctccttc
agcacaacgcttccatggacgacatgcaaaaactcctggaacacagccaactgcaagcag
tatctgtccactgacagcaacgtcacctggaccaatgaatccacctcgcctgccgaggag
ttctatacacggaaggtgttgcaggtgcacctgtccccaggtcttcatcaactgggtgcg
gtgagctggcagctggccctctgtctgctcttcatcttcaccatcgtctatttcagcatc
tggaagggggttaagacttccggcaaggtagtatgggtgacagcgaccctgccatatgtg
gttctgttgatcttactggtgcgaggcgccactctgcccggcgcatggagaggcgttgtc
ttctacctgaagcctaactgggagaagctcttgagcactacggtttggattgatgcagca
gcccagatcttcttttctcttggtccaggttttggtgtgctcctggcctttgccagctac
aatccctttcacaacaactgttacaaagatgcgttggtgaccagctcagtgaactgtcta
accagcttcatgtcaggctttgtgatcttcaccgtactgggatacatggctgagatgcgg
aaggaaggggtggagacagtagcaaaggatgctggtcccagtctacttttcatcgtctac
gcggaggccatcaccaacatgcctgctagcactttccttgctattatcttcttcctcatg
atcatcatgctgggattagatagcacgtttgctgggttggaaggagtgatcaccgccatg
ttggacgagtttccccacctgttggcccgcaggagagagtggtttgtgctaggtctggtg
tgtgtctgctacctgggagctctgtccacacttacctatggaggggcgtttgtggtgaaa
ctgtttgaagaatacgcaacaggccctgctgtcatcactgtagtcttccttgaagtcatt
gctgtttcctggttttatgggacgacacgtttctgcaatgacgtgcacctgatgcttggc
ttctcccccggactgttctggagggtgtgttgggtggccatctgcccctgcttcctactg
ttcatcatcggaagtttcctggcctttcctcctgaggtgaggctgtttaactacctgtac
ccattctggaccactgtactgggctactgcatcggtgtctcctctttcatctgtgtgcct
tcctacatggtctaccacctgctcaccaccaaagggaccttcaaacagcgtctgatgaag
agcatcacccctgagcctgcaaacattgaaggcctgcacagagatatcatcatcaccaac
gcggtgtga
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