Ictalurus punctatus (channel catfish): 108279874
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Entry
108279874 CDS
T04658
Symbol
srgap1b
Name
(RefSeq) SLIT-ROBO Rho GTPase-activating protein 1b isoform X1
KO
K07526
SLIT-ROBO Rho GTPase activating protein
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ipu04131
]
108279874 (srgap1b)
Membrane trafficking [BR:
ipu04131
]
Endocytosis
Bin/Amphiphysin/Rvs (BAR) family proteins
F-BAR proteins
108279874 (srgap1b)
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
108279874 (srgap1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
FCH
SH3_1
SH3_2
SH3_9
DUF952
Motif
Other DBs
NCBI-GeneID:
108279874
NCBI-ProteinID:
XP_017349932
Ensembl:
ENSIPUG00000020780
UniProt:
A0A2D0T4U7
LinkDB
All DBs
Position
19:complement(21120990..21180790)
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AA seq
1083 aa
AA seq
DB search
MMSGTVKFKKEKEILTEYESQVKEIRSQLLEQQKCLEQQTEVRVQLLQDLQDFFRKKSEI
ESEYSRNLEKLAERFMAKTRSTKDHQQYKKDQNLLSPVNCWYLLLNQVRRESKDHATLSD
LYLNNVITRLSHVSEDNTRLLKKSKEITFQLQEDLMKILNEVYTVMKTYHIYHNETLSSE
NKLKEAERQGERQGRGGEVFSLRNEERHQRRNAARKIQKMKEKRQAKYSENKLKVMKARN
EYLLTLEAANAALFKYYIQDLSHLIDCCDLGYHSSLSRALRTYLSAEYSLETSRHEGLDI
LEGAVESLDPRSDRQRFMETHPTAFTPPARFNFQPHMGDQVSQITAMPQVQAELLLRYQQ
LQSRLSTLKIENEEVKKTSEATLSTIQDMLNMEDYDVSESFQHSRSTESVKSSVSDTYLS
KPSLAKRRANQQETELFYFTKLREYLEGSNLISKLQAKHDLLKRSIAEGYRADIMTTSRR
RNSHSRHQDSAKAIPLIVESCIRYINLYGLQHQGIFRVSGSQVEVNDIKNSFERGNDPLT
DEENNHDINSVAGVLKMYFRNLDNSLFPKEKFNDLISCVRTENLYERALSIRKLLMTSPR
PTLVIMRYLFAFLNHLSQYSDENMMDPGNLAICFGPTLMPTPDLLDQVSCQAHVNEIIKT
IIIHHEAIFPDTKELEGPVYEKCMSSTEYCESPYSEPGVFEEGEQDGGTETQTSEEEGEP
VEAIAKFDYVGRSGRELSFKKGASLLLFQRASEDWWEGRCNGTDGLIPHQYITLQDEEAM
SDTLSQKADSEHSSTPTDEVNSRRSLTSPTEPRLPETFISRHRKRTEALLRRAPGHCHGN
GLERSSPPVTVTVTGHFSPRELLRGHSGHQDSPETTRRRTGHNNNNNSSNTTTTTNGSLS
SSISRHESLRRDRERESPPIRQSPSSLHCSVPEQRTRTLNTHTIAQGGVLLYCVNVQDIE
ETMSLALNELRELERQSGKPDLVLDTLDQMKSSPSLPSGSTPSTLSSPSDSPSPLSPHSP
LPPLPGPSSRRCPEPIPSPRMGVTLRPPALRPKPAILPKTNAQLPQQPPTPPQNFPNDKS
GTM
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaggcacggtgaagtttaaaaaggagaaggagatcctcacggagtatgagagc
caagtgaaagagatccgctctcagctgttggagcagcagaaatgtctggagcagcagacg
gaggtgcgagtgcagcttctccaggacctgcaggatttcttccgcaagaagtccgagatc
gagagcgaatactcgcgcaacctagagaagctggccgagcgcttcatggccaaaacacgc
agcaccaaggaccaccagcagtacaagaaggaccaaaacctgctgtcgcctgtaaactgc
tggtacctgctgctgaaccaagtgcgcagagagagcaaggatcacgccacactcagcgac
ctctacctcaacaacgtcatcacacgcctctcacacgtcagcgaggacaacacacgcctg
ctcaagaaaagtaaagagatcactttccagttgcaggaggacctgatgaagattcttaat
gaagtctatacggtgatgaaaacctaccacatataccacaatgagactctgagctcagag
aacaagctgaaggaggcagagcggcagggcgagagacagggccgaggtggagaggtgttt
agtctgcgcaacgaggagcgccatcagcgccgcaatgccgcccgcaaaatccagaagatg
aaggagaagcgccaggccaaatactctgagaataagctgaaggttatgaaagctcgcaac
gaatatctgttgactctggaagctgccaacgctgctctgtttaagtactacatccaggac
ctgtcccacttgattgactgctgtgacctgggctaccactccagcctgagccgagcattg
cgcacgtacctgtcggccgagtatagtctggagacgtctcgtcacgagggtctggacatc
ctggagggggcagtagagagtctagacccccgcagtgaccgccagcgctttatggaaact
caccccactgcgttcacaccacctgctcggttcaacttccagcctcacatgggggaccag
gtgagtcagatcacggcgatgccgcaggtgcaggctgaacttcttctccgctatcagcag
ctccagtctcgtctttccacactgaagattgagaacgaggaggtgaagaagacatccgag
gccaccctgagcaccatccaggacatgctgaacatggaggactacgacgtgtctgagagt
ttccagcacagccgctccaccgagtcagtcaagtccagcgtgtccgacacctacctcagc
aaacccagcctggccaagagacgagccaaccagcaggagacggagctcttctacttcact
aaactgcgggagtatctggaaggcagtaacctcatctccaaactgcaggccaagcacgat
ctactgaagaggagcatagcggagggctacagagcagacataatgaccacgagccgtcgt
cggaactcccacagcaggcaccaggactctgccaaggccattccactgattgtagagagc
tgcatccgctacattaacctctacggtttgcagcaccagggtattttcagagtgtctggc
tctcaggtggaggtaaacgacatcaagaactcatttgagagaggaaacgaccctctgacg
gatgaggagaacaaccacgacatcaactccgtggccggcgtgttgaagatgtacttccgc
aacctggacaactcgctcttccccaaggagaagttcaatgacctcatctcctgcgtccgc
acagagaatctgtatgagcgagcgctgtctatccgaaagctcctgatgacatcaccacgc
cccacgcttgtgatcatgagatacctttttgcattcctcaatcatctgtctcagtacagc
gacgagaacatgatggaccccgggaacctggccatctgctttggcccgacactgatgccc
actccagatctgctggaccaggtctcctgccaggcgcacgtcaacgagatcatcaagacc
atcatcatccaccacgaggccatctttcccgacaccaaagagctggaggggcctgtctac
gagaagtgcatgagcagcacagagtactgtgagagtccatacagtgagccaggagtgttc
gaggaaggagaacaagatggcggcactgaaacgcagaccagtgaagaagaaggtgagccg
gtggaggccatagcgaagtttgactatgtcgggcgctcgggccgtgagctgtcctttaag
aagggagcgtctctgctgctcttccagagggcttctgaggactggtgggaaggacggtgt
aacggcacggatggactcataccacaccagtacatcacactgcaggatgaggaggccatg
tcagacactctgagtcagaaagcagacagtgaacacagcagcactcctacagatgaagta
aactccaggaggtccctgacctccccgactgaacccagactgccagaaacattcatcagc
cgccacaggaagagaacggaggccctcctgcgccgtgcccccggtcattgccatggtaac
ggtctggagcgcagctcgccgccggtgacggtgacagtgacgggacatttcagcccacgt
gagctgctgcgtggacacagcggacaccaggacagccctgaaacgacacgccgccgcaca
ggacacaacaacaacaacaactcctccaacaccaccaccaccaccaacggctctctgagc
tccagcatcagccgtcacgagtctctgcgcagggacagggagagggagagtccacccatc
cgccagtcgccatcctcactgcactgcagtgtccctgaacagcgtacacgcacactcaac
acacacaccatagcacagggtggagtacttttatattgtgtgaatgtgcaggacattgag
gagaccatgagcctagccttgaacgagctacgtgagctggagcgccagagtgggaagccg
gacctggtgctcgacacgctggaccagatgaagagcagcccctcccttccatcaggctcc
accccctccaccctgtccagcccatcggattcaccgagcccgctgagtccccacagtccc
ctgcctcctctgcctggcccatcatcccgccgctgccccgagccaatcccctcaccccgc
atgggcgtgaccctccgccccccagccctgcgccccaaacctgccatcctgccaaaaacc
aatgctcagcttcctcaacagcccccgaccccgccccaaaacttccccaacgacaaatcg
ggcaccatgtga
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integrated database retrieval system
