Ictalurus punctatus (channel catfish): 108280216
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Entry
108280216 CDS
T04658
Symbol
pax3a
Name
(RefSeq) paired box protein Pax-3a isoform X1
KO
K09381
paired box protein 3/7
Organism
ipu
Ictalurus punctatus (channel catfish)
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ipu03000
]
108280216 (pax3a)
Transcription factors [BR:
ipu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108280216 (pax3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
HTH_23
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
108280216
NCBI-ProteinID:
XP_017350537
Ensembl:
ENSIPUG00000011985
UniProt:
A0A2D0T6L3
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All DBs
Position
20:14001625..14028143
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AA seq
492 aa
AA seq
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MAALAGGIPRMVRPTPPQNYPRGGYSLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPKQNTSPDVDKKIEE
YKRDNPGMFSWEIRDKLLKDGICDRNNVPSVSSISRILRCKFGGNGEDEEDDDEVEKREL
EENERRAKHSIDGILGDRSSHSDEGSDVDSEPGLPLKRKQRRSRTTFTAEQLEELERAFE
RTHYPDIYTREELAQRAKLTEARVQVWFSNRRARWRKQAGANQLMAFNHLIPGGFPPSAM
SSLQPYQLPESPYSASSIPQAMSEQASTVHRPQPLPPTSVHQSSLATAPGTQDATSAYCL
SSGRHGFSGYSDSFVPAPSHSNPVNPAISNGLSTQVMGLLNPGGVPHQPQGDFSLSPLTG
PLEPSAGMAASCHSSQRLESLSGLASMPSLPSSQSYCPPSYSSPAYSVDHMAPYQYSQYG
QSAFHYLKPNIS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atggccgccttagcagggggcattcccaggatggtgcgccccacgccaccccaaaactac
ccgagagggggctattcgctggaagtttccacaccattaggccagggccgagtaaaccag
ctcggcggtgttttcattaacggacgcccgttgccaaaccacattcgccataagatcgta
gaaatggcgcatcacgggatccggccgtgcgtcatctcgcgccagctgcgcgtctcacac
ggctgcgtgtccaaaatcctgtgcaggtaccaggaaacgggatccatccggcctggcgct
atcggaggtagcaaaccgaagcagaacaccagtcccgatgtggataagaaaatcgaggaa
tacaagagagataacccgggaatgttcagttgggagatccgagacaagctgctgaaagac
ggcatctgtgacagaaacaacgtgccctcagtcagctcgatcagtcgcatactgcgctgt
aagtttggcggaaatggagaggatgaagaggacgatgatgaagttgaaaagagggagctt
gaggaaaacgaaagacgtgcgaaacacagcattgatggcattcttggagacagatcgagt
cattcggacgagggttcagatgtagattcagaaccaggtttgcccctgaagagaaaacag
cgtcgcagtcgcacaacattcactgctgagcagcttgaggagctggagagagcttttgag
cgcacacactatcccgacatctacacacgcgaggagctcgcccaaagagccaaacttact
gaggcgagagtacaggtgtggtttagcaacagacgggctcgctggaggaagcaggcagga
gccaatcagctgatggcattcaatcacctgattcctggaggattccctccatcagccatg
tcaagcctacagccttaccagcttccagaaagtccttactctgcatcctccatcccacaa
gcaatgtcagaacaggccagcacagtgcacaggccccagcctcttcctccgacttcagtg
caccagagcagtctggccaccgccccgggaacccaggacgctacttcagcctactgcctc
tcttcaggccgtcacggcttctcaggctactcagacagctttgtgcctgcaccgagtcac
tctaacccggtcaaccctgctatcagcaatggcctctcaacacaggtgatgggactgttg
aacccaggaggcgtgcctcaccagccgcagggagacttctctctctcccctctcactggt
cctctggagcccagtgctggcatggctgccagctgccactcatcacagagactggagtct
ctgtctggactggctagcatgccttctctgcccagctcacagtcttactgcccacccagc
tacagctcgccagcctacagcgtcgaccatatggcaccataccaatacagccaatatggg
caaagtgcctttcattatctgaagcccaacatcagctga
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