Ictalurus punctatus (channel catfish): 108280464
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Entry
108280464 CDS
T04658
Name
(RefSeq) sialidase-3
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
ipu
Ictalurus punctatus (channel catfish)
Pathway
ipu00511
Other glycan degradation
ipu00600
Sphingolipid metabolism
ipu01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ipu00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108280464
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
108280464
Enzymes [BR:
ipu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
108280464
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Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Sortilin-Vps10
Motif
Other DBs
NCBI-GeneID:
108280464
NCBI-ProteinID:
XP_017350944
Ensembl:
ENSIPUG00000007468
UniProt:
A0A2D0T7T8
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All DBs
Position
2:39668738..39671159
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AA seq
371 aa
AA seq
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MGSCVSKSSSHTPETNSSETPLFTNTIYRIPALIYINHDQTLLAFAEKRTSLNDADATLL
VMRRGTQQNGSVQWSSVQELTTARLDKYRTMNPCPVYERQSKTVFLFFNCVFGKVSERDQ
ISKRKNQARLCHVTSRDSGQTWSDVTDLTESVIGNEMKNWATFSVSPGHGIQMNDGRLII
PAYVYYIHCLVVKPYAFAFYSDDGGATWHYGRRVSVQSTECQMAEITKDDGKSSLYCNAR
GNKSCQNHRVEAVSKNRGVDFETFSQKLVELPYGCQGSVVSFQHGGKTCLLFSHTTDKKK
RKDLGVYLNMTPDKVSGWKKPHIINPGVSGYSDMTRRGEEEERFACLMERGTTDLEEIAF
KEFSLHEIMNN
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgtgcgtatcgaaaagctcttcccacacacccgaaacaaactcgtcagaaaca
cctttattcacaaacacaatctacagaatcccagctctaatctacattaaccatgaccaa
actcttcttgcttttgccgagaagcgaacatcattaaatgacgccgacgccacgctcctg
gtcatgaggaggggaacgcagcagaacgggtccgttcagtggtcatctgttcaggagctt
acgacagctagactggataaatatcgtaccatgaacccgtgtccagtctatgagagacag
tccaagacggtcttcctgttctttaactgtgtgttcggtaaagtcagtgagcgagatcag
atttccaagcgtaagaatcaggcccggttgtgtcacgttactagcagggacagcgggcag
acttggagcgacgtgacggacttgacagaaagtgtgattggaaatgagatgaagaattgg
gccacgttcagtgtcagccctgggcacggcattcaaatgaacgatggcagactcatcatt
cctgcttatgtttattatattcactgtttagttgtaaaaccttacgcctttgcgttctac
agtgacgatggcggggccacgtggcactatggacggagagtgagcgtccagtccaccgag
tgtcagatggcggagatcactaaagacgatggcaaaagttccttatactgtaacgccaga
ggaaataagtcatgtcagaaccatagagtcgaggctgtgagtaagaatcgtggggtggat
tttgagacctttagccagaagctggtagagctcccgtatggctgccagggtagcgtggtg
agctttcaacatggcgggaagacttgcctccttttctcccatacaactgacaagaagaag
aggaaagatctcggggtttatttgaacatgacccctgataaagtctctggttggaagaaa
ccacacatcatcaaccccggcgtcagcggatactcagacatgactcggcgaggtgaggaa
gaagaacgctttgcttgcctcatggaacgtgggacgacggaccttgaagaaatagccttc
aaggagttttctctccacgagatcatgaacaattag
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