KEGG   Ixodes scapularis (black-legged tick): 8030285
Entry
8030285           CDS       T01131                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
isc  Ixodes scapularis (black-legged tick)
Pathway
isc03020  RNA polymerase
isc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:isc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    8030285
  09124 Replication and repair
   03420 Nucleotide excision repair
    8030285
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:isc03021]
    8030285
   03400 DNA repair and recombination proteins [BR:isc03400]
    8030285
Transcription machinery [BR:isc03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     8030285
DNA repair and recombination proteins [BR:isc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      8030285
SSDB
Motif
Pfam: TFIIS_C RNA_POL_M_15KD Zn_ribbon_recom TF_Zn_Ribbon DZR CpXC
Other DBs
NCBI-GeneID: 8030285
NCBI-ProteinID: XP_002399649
EnsemblRapid: LOC8030285
UniProt: B7PRG9
LinkDB
Position
Unknown
AA seq 129 aa
MGISFDGLGDEGPGFVGIKFCQECNNMLYPKEDKENRVLLYACRNCDYQQVADNNCIYVN
KITHEVDELTQIVSDVVHDPTLPRTEDHTCPKCSHREAVFFQAQSRRAEDEMRLYYVCTN
TNCTHRWTE
NT seq 390 nt   +upstreamnt  +downstreamnt
atgggcattagcttcgacggactcggcgacgagggaccgggcttcgtgggaatcaagttc
tgtcaggagtgcaacaacatgctctatccaaaggaggacaaggaaaaccgggtgcttctc
tatgcgtgtcgaaactgcgactaccaacaggtggccgacaacaactgcatctacgtcaac
aagatcacgcacgaagtcgacgagctgacccagatcgtgtcggacgtggtgcacgacccg
acactgccgcgcaccgaggaccacacgtgccccaagtgctcgcatcgggaggccgtcttc
ttccaggcacagtcccgcagggcagaggatgaaatgaggttgtactacgtgtgcaccaac
accaactgcacccaccgctggactgagtag

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