Ixodes scapularis (black-legged tick): 8032116
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Entry
8032116 CDS
T01131
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
isc
Ixodes scapularis (black-legged tick)
Pathway
isc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
isc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
8032116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
isc03021
]
8032116
Enzymes [BR:
isc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
8032116
Transcription machinery [BR:
isc03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
8032116
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Saposin
Motif
Other DBs
NCBI-GeneID:
8032116
NCBI-ProteinID:
XP_029835688
EnsemblRapid:
LOC8032116
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MVKEQFREADTSMKIGQMRFGVLNSHDIQQLSHVHCVSKNLYQRDSLHKAVPYGVLDNKL
GTSQKDKKCETCGKGLADCIGHYGLVDLELPVFHVGYFRATQNILHCVCKTCARVLVPPQ
ERQGFLDALQRPTLSYLQKKALHKKIIERCRKQSACHFCGARNGQVKKCGLLKLVHERFK
ATKKNDAMLAEFLEDFDEARGYNPELDSVMGKVTSDILNPLVVLHLFRRILDEDVPLLVM
NPKCGRPEDLILTRIPVPPLCIRPSVVSELKAGTNEDDVTVKLTEIIFLNDVIQRHRASG
AKMQMIMEDWDFLQLQCALYVNSETSGIPLNMQPKKPTRGFVQRLKGKHGRFRGNLSGKR
VDFSGRTVISPDPNLRIDQVGVPVHVAKILTYPERVTQHNLALMRTLVRNGPDVHPGANF
LESRDSGFKRYLRYGNRDLLAQQLRPGDVVERHLRDGDVVLFNRQPSLHKLSIMAHLAKV
LPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEARAEALVLMGTRANLVTPRNGEPLIA
AIQDFITGGYLLTQRDVFFDRAKAAQLAAYMLAGKDVSISVELPPPAIRKPVCLWTGKQI
FSLIIRPSRSCPVLASLRAKGKSYTSGEEMCANDAYVLIRNSELLSGTMDKGTMGSGSKN
NIFYILLRDYGDQYAADAMWRLARIASFYMQNRGFSIGIGDVTPGAGLLKAKHDLVSEGY
ARCEEYIQQLKCGKLQAQPGCNEEETLEAVSLKELSVVRDHAGKACLRELHKTNSPLIMA
VCGSKGSFINISQMIACVGQQAISGHRVPNGFEDRSLPHFERNDRTPQARGFVEDSFYSG
LTPTEFFFHTMGGREGLVDTAVKTAETGYMQRRLVKSLEDLCSHYDMTVRNSCGDIVQFC
YGADGLDPAAMEGKDDTPVDFGRVMELTRARKPCRGEKPLDQDAILRIGEEVLGGKSYEG
CGESFREALSKFVHGYAAKVASTRARHGLDGSGDARPLVLWQLDRLTASQLRSFFATCRE
KYFRAVMEPATAVGAVCAQSIGEPATQMTLKTFHFAGVASMNITQGVPRIKEIINASKNI
STPIITAALAVNQDAEYARRVKGRIEKTTLGEVSEYLEEVFLPDECFVLIKLDLDRIRLL
QLEVNADTVCYSIATSKLRIKGQNLSVVGSAVITVRPTETAKMSLYYALQTLKEQLPSVV
IKGIPSTSRAVIHADDTGPTTTYRLLVEGDGLREVMATYGVLGTRTSSNNTSEVEKCLGI
EAARATIIREIGVTMESHGISVDRRHLMLLADLMTFRGEVLGITRHGLARMKESALMLAS
FERTADHLFDAAYYGQVDEITGVSESIILGVPMGIGTGFFDMVHRVDWRPLAEPRRLVFD
RDEFHLNVAAANR
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaacagttccgcgaggccgacacctcaatgaagatcggccagatgcgcttc
ggcgtgctcaactctcacgacatccagcagctgagccacgtgcactgcgtgagcaaaaac
ctgtaccagcgcgactcgctgcacaaggccgtcccatatggcgtgctcgacaacaagctg
ggcaccagccagaaggacaagaagtgcgagacatgcggcaagggcctggccgactgcatc
ggccactacggcctggtcgacctcgagctgccggtcttccatgtcggctacttccgagct
acgcagaacatcctccactgcgtgtgcaagacgtgcgcgcgcgtgctcgtgccgccgcag
gagcggcagggcttcttggacgcccttcagcggcccacgctgtcctacctccagaagaag
gccctgcacaagaagatcatcgagcgctgccgcaagcagtccgcctgccacttctgcggc
gcccgcaacgggcaggtcaagaagtgcggactgctgaagctggtccacgagcgcttcaag
gccaccaagaagaacgacgccatgctcgccgagttcctggaagacttcgacgaggcccgt
ggctacaacccggagctcgattccgtcatgggcaaggtcaccagtgacattctgaacccg
ctcgtggtgctgcacctcttccggcggatcctggacgaagacgtgccgctgctggtgatg
aaccccaagtgcgggcgccccgaggacctgatcctgacccggatccccgtccctccgctc
tgcatccggccctcggtggtgtccgagctgaaggcggggaccaacgaggacgacgtgacg
gtcaagctgaccgagatcatcttcctgaacgacgtgatccagcgccaccgggcctccggg
gccaagatgcagatgatcatggaggactgggacttccttcagctgcagtgcgcgctgtac
gtgaacagcgagacgagcggcatcccgctgaacatgcagcccaagaagcccacccgaggc
ttcgttcagcggctgaagggcaagcacggccgcttccggggcaacctgtcgggcaaaagg
gtggacttctcgggccgcaccgtcatctcgccggaccccaacctccgcatcgaccaggtg
ggcgtgcccgtgcacgtggccaagatcctgacctacccggagcgggtgactcagcacaac
ctggcgctgatgcgcacgctggtgcgcaacggcccggacgtgcacccgggggccaacttc
ctggagtcccgggactcgggcttcaagcgctacctgcgctacggcaaccgggacctgctg
gcccagcagctgcgcccgggggacgtggtggagcgccacctgcgggacggcgacgtggtg
ctcttcaaccggcagccctcgctgcacaagctcagcatcatggctcacttggccaaggtg
ctgccccaccggacgttccgcttcaacgagtgcgtgtgcacgccgtacaacgcggacttt
gatggggacgagatgaacctgcacttgccgcagacggaggaggcccgggcggaggccctg
gtgctcatgggcacccgggccaacctggtgacgccccgcaacggggagcccctcatcgcg
gccatccaggacttcatcacgggcggctacctgctcacccagagggacgtcttcttcgac
cgggccaaggccgcccagctggccgcctacatgctcgccggcaaagacgtcagcatctcg
gtggaactccctccaccagccatccgcaagcccgtctgcctctggacgggcaagcagatc
ttcagcctcatcatccgccccagccggtcgtgcccggtcctggccagcctccgtgccaag
ggcaagtcctacacctccggtgaagagatgtgtgccaacgacgcctacgtgctcatccgc
aacagcgagctcctcagcgggaccatggacaagggcaccatgggctccggctccaagaac
aacatcttctacatcctcctccgcgactacggtgaccagtacgcggcagacgccatgtgg
cgcctggcgcggatcgcatccttctacatgcagaaccgcggattctctatcggtatcggt
gacgtgacgccgggggctgggctgctgaaggcgaagcatgacctggtcagcgagggctac
gcccgctgcgaagagtacattcagcagctgaagtgcgggaaactccaggcgcagcccggg
tgcaacgaagaggagacgttggaggcagtcagcttgaaggaactgtcggtggtccgcgac
cacgccggaaaggcgtgcctccgcgagctccacaagacaaacagcccgctgatcatggcg
gtgtgcggatcaaagggctccttcatcaacatcagccagatgatcgcgtgcgtcgggcag
caggccatcagcggacaccgagttccgaacgggttcgaagaccgttcgctaccgcacttc
gagcgcaacgaccgcactccgcaggcaagggggttcgtcgaagacagcttctactccggg
ctcacgccgaccgagttcttcttccacacaatgggcggcagggagggcctcgtggacacg
gctgtgaaaaccgcggagacgggctacatgcagcgacggctcgtcaagtccctcgaagac
ctgtgctctcactacgacatgacggttcgcaactcgtgcggggacatcgtgcagttctgc
tacggcgcggacggtttagacccggccgccatggagggcaaggacgacacgccggtcgac
ttcgggcgggtcatggagctgacgcgggctcgcaaaccctgccgcggggagaagccgctc
gaccaggatgccatcctacggatcggcgaggaggtcctcggcggcaagtcgtacgaaggt
tgcggggagagctttcgcgaggccctctccaagtttgtgcatgggtacgcggcaaaggtt
gcaagcacgcgggcgcggcacggtctggacggttccggcgacgcgaggccgctggtgctg
tggcagctggaccggctgacggcctcgcagctccgcagcttttttgccacatgccgggag
aagtacttccgggcggtcatggagccggcgacggcggtgggagcggtttgcgcccagagc
atcggcgagccagccacgcagatgaccctcaagacgttccactttgcgggcgtggcgtcc
atgaacatcacgcagggcgtgccccgcatcaaggagatcatcaacgccagcaagaacatc
agcaccccaatcatcacggcggccctggcagtgaaccaggatgcggagtatgcccggcgt
gtcaaggggcgcattgagaagaccacgctgggcgaggtgtcagagtacctggaggaggtc
ttcctgccggacgagtgctttgtgctcatcaagctggacctggatcgaattcgcctgctc
cagctggaggtcaacgcagacacggtctgctactccatcgccacctcgaagctgcgcatc
aagggccagaacctgagcgtggtggggtccgcggtgatcaccgtgcgtcccaccgagacg
gccaagatgtccctctactacgccctgcagaccctcaaggagcagctgcccagcgtggtc
atcaagggcatcccctccacctccagggccgtcatccacgccgacgacacgggcccgacg
accacctaccggctgctggtggaaggggacggcctgcgggaggtgatggccacctatggg
gtgctgggcacgcgcacctcgtccaacaacacgtccgaggtggagaagtgcctgggcatc
gaggcggcccgggccaccatcatccgcgagatcggcgtgaccatggagagccacggcatc
agcgtggaccggcgccacctcatgctgctggccgacctgatgaccttccgcggggaggtg
ctgggcatcacccgccacggcctggcccgcatgaaggagagcgccctcatgctggcctcc
ttcgagcgcaccgccgaccacctctttgacgccgcctactacggccaggtggacgagatc
actggcgtcagcgagagcatcatcctcggcgtgcccatgggcatcggcactggcttcttc
gacatggtgcaccgggtcgactggaggcccctcgccgagccccgcaggctcgtcttcgac
cgcgacgagtttcacctcaacgtcgccgccgcaaatcggtga
DBGET
integrated database retrieval system
