Ipomoea triloba (trilobed morning glory): 116009206
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Entry
116009206 CDS
T07384
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116009206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116009206
Enzymes [BR:
itr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116009206
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116009206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zinc_ribbon_10
Motif
Other DBs
NCBI-GeneID:
116009206
NCBI-ProteinID:
XP_031104597
LinkDB
All DBs
Position
2:complement(8066627..8086197)
Genome browser
AA seq
1398 aa
AA seq
DB search
MMMRKREEIQFTKQPYIEDVGPRKIKSIQFSTFSGSEVMKSAEVEVYRGVYYDASKNPIP
NGLLDPRMGPPNKTKSCATCDGDFKQCPGHYGYLNLALPVFNVGYLPIIVDILKCICKGC
SRILLGEKERLDFLRKMRNTKLEHLKKNELLKRVVKRCTAMTSGRKAVICSRCGCVNGMV
KKGPLKIIHEYGSQFLDECHNAVSNKIKGSITVPPELDSKTVHALFKKMIDEDCELLYLS
DKPEKLLVTSIPVPPIAIRPSVFVDGGMQSNENDITERLKRIIQANSSLRQEISDTTLPA
RSLASWVDLQMEVAQYINSDVRGLPPQMQASRPLSGFVQRLKGKQGRFRGNLSGKRVEYT
GRTVISPDPNLKITEVAIPILMARILTFPERVSRHNIEKLRQCVRNGPNKYPGAKYIRHP
DGTEISLMYSSRKRHADELKYGYIVDRHLEDGDAVLFNRQPSLHRMSIMCHRARIMPWRT
LRFNESVCNPYNADFDGDEMNMHVPQTVEARTEALLLMGVQNNLCTPKSGEILVASTQDF
LTSSFLITRKDTFYDRASFSLMCSYMGDAMDHIDLPTPALIKPVELWTGKQLFGVLLRPY
SKMRVYLNLTLKEKSYPREKGLEKGLETMCPSDGFVYFRNSELISGQLGKATLGNGNKDG
LYSVLLRDYNTHGAAICMNRLAKLSARWIGNHGFSIGIDDVQPGKELVEKKTMEIEKGYG
ICEAYIASFNKGELEEQPGCDAAQTLEANITKELNAIRVKTGQVCTNTLHWRNSPLIMSQ
CGSKGSDINISQMVACVGQQSVGGCRAPNGFMDRSLPHFPTKSIFPAAKGFVASSFYDGL
SATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSILYDRTVRNASSCIVQFEY
GDDGMDPAQMEEKEGHPLNFNRLFMKVKATCPPGEEKSLSSSEIQQMVHKRLSEHDTTPD
GGCSAAFCNSLKEFIENNCVASLEKTRKDLKLDGEHNAGEDLDALESITLNISGVTRKQL
QVFLETCISRYHAKKLEDGTSIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIK
EIINAAKRISTPIIEAKLSCDDDLDFAKIVKCRIENTLLGQVAKSIKIVMAARVASIVIV
LDLEAIQTSFLSIDAYIVKESILQTKNIKLKEQHIKVLDPKKLEVIPHADRSKLHFELHR
LKNKLPGVVVKGINTVGRAVINKAEKEKEMETEKEKYNLLVEGTGLLAVMGTEGVVGRHT
KTNHIMEVNQVLGIEAARRRIIEQIKDIMSDYKMTIDLRHMMLLADLMTFKGEVLGITRF
GMQKMKDSVLTLASFEKTADHLFNASVSGRDDKIEGVGECIIMGIPMDMGTGMFKVMQSN
TSHPVELNYGKESIIPRD
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaggaaaagagaagaaatacagttcaccaagcagccttacattgaagatgtg
ggccctcggaaaataaaaagtattcagttttcaactttctctggttctgaagtaatgaaa
tcagctgaagttgaagtctatcgtggagtttactacgatgcttccaagaatcctattccc
aacggcctattagaccctcgcatgggtcctccaaataagaccaaatcttgtgccacatgc
gatggagatttcaaacaatgtcctggtcactatggatacttgaatcttgctttaccagtt
tttaatgttggatatctacccatcattgtggacatcttgaaatgcatttgcaagggttgt
tcccgcattcttcttggtgaaaaagaacgtctagacttcctaagaaagatgagaaataca
aagttggagcatttgaaaaagaatgagttgctcaaaagagttgtgaaaaggtgcactgcc
atgacaagtggtcgcaaggcagtgatttgttccagatgtggatgcgtaaatggaatggtg
aaaaagggccctttgaagatcatccatgaatatggaagtcagtttttagatgagtgccat
aatgctgtttctaacaaaatcaagggatctattactgtgcctccagaactcgactcgaag
acagttcacgccctcttcaagaaaatgatagatgaggactgtgagttgctttatcttagt
gacaaaccagaaaaactccttgtcacaagtatccctgtgccaccaatagcaatacgccct
tctgtctttgtggatggtggaatgcagagtaatgagaatgacatcacagagaggctgaag
cgcattatccaagcaaattcaagtcttcgacaagaaatttccgatacaactcttccagct
agaagtctggctagttgggttgatctccaaatggaagttgcacagtacataaatagtgat
gtacgtggattgccaccacaaatgcaagcttccaggccactgagtggctttgttcagcgc
ctcaaaggaaagcaaggtcgtttccgtggaaatctgtcaggcaagcgtgttgaatatact
ggacgcactgttatttcacccgatccaaatcttaaaatcactgaggtagcaattcctatc
ttaatggctcgaattttaacatttcctgagcgtgtttcacgacacaacatagagaagttg
aggcaatgtgttcgcaatgggcccaacaaataccctggtgcgaagtatatcaggcatcct
gatggtaccgagatttcgttaatgtactctagtagaaagcgtcatgctgatgaattgaaa
tatggctacatagttgatcgtcatttggaagatggagatgctgttctatttaatagacaa
ccaagtttacatcgaatgtctatcatgtgccatcgggcaaggattatgccatggcgcaca
ttgagatttaatgaatctgtttgcaatccctacaacgctgattttgatggtgatgagatg
aatatgcatgtaccacaaacagtagaggctcgcacagaggctcttttgttgatgggggtc
caaaacaatttatgcaccccaaagagtggggaaatcttggttgcttctacacaggatttt
ctaacatcttcctttctcattacaaggaaggacacattttacgatcgtgcttcgttttca
cttatgtgttcatacatgggcgatgcgatggatcacattgatttgccaactccagcttta
attaagccagttgagctttggactggaaaacaattatttggtgtgcttctacgtccatat
agtaaaatgagagtttacttaaaccttactcttaaggagaagagttacccgagagaaaaa
ggtctagaaaaaggtctagaaacaatgtgcccaagtgatgggtttgtttacttccgcaac
agtgagctgataagtgggcaacttggaaaggccacactaggaaatggaaacaaggatgga
ctttattctgtgctgctaagggactataacacacatggtgctgcaatatgtatgaatcgg
cttgcaaagttgagtgctcgttggatagggaatcatggattttcaattggcatcgatgat
gtccaaccaggaaaggagttagttgaaaagaagacaatggaaatagagaaggggtatggg
atatgtgaagcgtatatagcttcatttaacaagggggaacttgaggaacaacctggctgt
gatgctgcacagacacttgaagccaatataacaaaggaactgaatgctatccgagtgaaa
actgggcaagtgtgcactaatacactacattggaggaatagccccttaattatgtcacaa
tgtggttcaaaaggctcagatatcaatattagtcagatggttgcatgtgtcggccagcaa
tctgttgggggttgtcgtgctccaaatggattcatggaccggagtcttcctcattttcct
acaaaatcaatatttccagctgctaaaggattcgtcgccagttcattttatgatggttta
agtgctactgagttttttttccacactatgggtggaagagaaggccttgtagacacagcg
gttaaaactgctgacacagggtatatgtctcggcggcttatgaaggctctggaggatctt
tcaattttgtacgacagaaccgtgcgaaatgcaagttcatgcatagtgcaatttgagtat
ggtgatgatggtatggaccctgcacagatggaagagaaagaagggcatcctctgaacttt
aatagattatttatgaaagttaaggcaacatgtcctcccggagaggaaaagagtctgtca
tcatcagaaatccaacagatggtgcataaaaggctttcagaacatgatacgactccagat
ggggggtgctcagcggccttctgcaattcattaaaagaattcattgaaaacaactgtgta
gcaagcttagagaaaacacggaaagatctcaaacttgatggggaacataatgcaggggag
gatcttgatgctcttgaaagtatcactttaaatatatcaggtgtaacaagaaagcaacta
caggttttcctagagacctgcatctctcgttatcatgcaaagaaattagaagacgggact
tcaatcggtgcaataggagctcagagtattggagaaccagggacgcagatgacattaaaa
actttccactttgctggtgttgcaagcatgaatgttacactcggtgttcctcgcataaaa
gaaattataaatgcagccaaaaggatcagcacacctattattgaagcaaaactttcatgt
gatgatgatctagattttgctaaaatagtgaagtgtcgtattgaaaatactcttcttggt
caggttgccaagagtattaagatagtgatggctgcgagagtagcatccatagttatagtt
cttgatttggaagcaattcaaacttcatttctttccatagatgcttatattgttaaggaa
tcaattttgcagactaaaaatattaagttgaaggaacagcacatcaaggttttagatcct
aaaaagctggaagttatccctcatgctgatcgaagtaaacttcattttgaactccaccgt
ctcaaaaataagcttcctggggttgttgtgaagggtatcaacactgttggacgtgctgtg
atcaacaaagccgaaaaggaaaaggaaatggaaacggaaaaggaaaagtacaacttgctt
gtggaagggactggtcttctagctgttatgggcacagaaggagttgttggacgtcataca
aaaaccaatcacatcatggaagtgaatcaagtacttggaattgaagccgcaagaaggcgt
ataattgaacagattaaggatatcatgtcagactataagatgactatagatttacgtcac
atgatgcttctagcagatctaatgacttttaagggtgaagtattaggaattactagattt
ggtatgcagaagatgaaagacagtgtattgacattagcctcctttgagaagactgctgat
caccttttcaatgcttctgtaagtgggcgggatgacaaaattgaaggagtcggtgaatgc
atcattatgggcataccaatggacatgggcacagggatgtttaaagttatgcaaagcaac
acttctcatccagttgagctgaattatggaaaagaatcaattatccccagagactga
DBGET
integrated database retrieval system
