Ipomoea triloba (trilobed morning glory): 116010342
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Entry
116010342 CDS
T07384
Name
(RefSeq) DNA-directed RNA polymerase III subunit 1-like isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116010342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
itr03021
]
116010342
Enzymes [BR:
itr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116010342
Transcription machinery [BR:
itr03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
116010342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_1
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
zinc_ribbon_10
Motif
Other DBs
NCBI-GeneID:
116010342
NCBI-ProteinID:
XP_031105562
LinkDB
All DBs
Position
2:complement(8037217..8056462)
Genome browser
AA seq
1411 aa
AA seq
DB search
MMMRKSEAMLFTKQPYIEDVGPRKIKSIQFSTFSGSEVMKSAEVEVYRGVYYDASKNPIP
NGLLDPRMGPPNKTKSCATCNGDFKQCPGHYGYLNLALPVFNVGYLPIIVDILKCICKGC
SRILLGEKERLDFLRKMRNTKMEHLKKNELLKRVVKRCTAMTSGRKAVICSRCGCVNGMV
KKGPLKIIHEYGSQFLDECHNAVSNKIKGSITVPPELDSKTVHALFKKMIDEDCELLYLS
DKPEKLLVTSIPVPPIAIRPSVFVDGGMQSNENDITERLKRIIQANSSLRQEISDTTLPA
RSLASWVDLQMEVAQYINSDVRGLPPQMQASRPLSGFVQRLKGKQGRFRGNLSGKRVEYT
GRTVISPDPNLKITEVAIPILMARILTFPERVSRHNIEKLRQCVRNGPNKYPGAKYIRHP
DGTEISLMYSSRKRHADELKYGYIVDRHLEDGDAVLFNRQPSLHRMSIMCHRARIMPWRT
LRFNESVCNPYNADLRFNESVCNPYNADFDGDEMNMHVPQTVEARTEALLLMGVQNNLCT
PKSGEILVASTQDFLTSSFLITRMDTFYDRASFSLMCSYMGDAMDHIDLPTPALVKPVEL
WTGKQLFGVLLRPYSKMRVYLNLTLKEKSYPREKGLEKGLETMCPSDGFVYFRNSELISG
QLGKATLGNGNKDGLYSVLLRDYNTHGAAICMNRLAKLSARWIGNHGFSIGIDDVQPGKE
LVEKKTMEIEKGYGICEAYIASFKKGELEDAPGCDAAQTLEANITKELNAIRVKTGQVCT
DTLHWRNSPLIMSKCGSKGSDINISQMVACVGQQSVGGCRAPNGFMDRSLPHFATKSIFP
AAKGFVASSFYDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSILYDR
TVRNASSCIVQFEYGDDGMDPAQMEEKEGHPLNFNRLFMKVKATCPPGEEKSLSSSEIQQ
MVHKRLSEHDTTPDGGCSAAFCNSLKEFIENNCVASLEKTRKDLKLDGEHNAGEDLDALE
SITLNISGVTRKQLQVFLETCISRYHAKKLEDGTSIGAIGAQSIGEPGTQMTLKTFHFAG
VASMNVTLGVPRIKEIINAAKRISTPIIEAKLSCDDNQKFARIVKGRIEKTLLGQVAKSI
KIVMAARVASIVIVLDLEAIQTSCLSIDAYIVKESILQTKKIKLKEQHIKVLDPGKLEVI
PHADRSKLHFELHRLKNKLPGVVVKGINTVERAVINKDEKEKEMGKEKYNLLVEGTGLLA
VMGTDGVVGCNTKTNHIMEVNQVLGIEAARQGIIGEIKYIMKQHGMTIDVRHMMLLADLM
TFKGEVLGITRFGIQKMKDSVLTLASFEKTADHLFNASVSGRDDKIEGVGECIIMGIPMQ
MGTGMLKVMQSNTSHPVELNYGKDSIIPRDD
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaggaaaagtgaagcaatgctgttcaccaagcagccttacattgaagatgtg
ggccctcggaaaataaaaagtattcagttttcaactttctctggttctgaagtaatgaaa
tcagctgaagtggaagtctatcgtggagtttactatgatgcttccaagaatcctattccc
aacggcctattagaccctcgcatgggccctccaaataagaccaaatcttgtgccacatgc
aatggagatttcaaacaatgtcctggtcactatggatacttgaatcttgctttaccagtt
tttaatgttggatatctacccatcattgtggacatcttgaaatgcatttgcaagggttgt
tcccgcattcttcttggtgaaaaagaacgtctagacttcctaagaaagatgagaaataca
aagatggagcatttgaaaaagaatgagttgctcaaaagagttgtgaaacggtgcactgcc
atgacaagtggtcgcaaggcagtgatttgttccagatgtggatgcgtaaatggaatggtg
aaaaagggccctttgaagatcatccatgaatatggaagtcagtttttagatgagtgccat
aatgccgtttctaacaaaatcaagggatctattaccgtgcctccagaactcgactcgaag
acagttcacgccctcttcaagaaaatgatagatgaggactgtgagttgctttatcttagt
gacaaaccagaaaaactccttgtcacaagtatccctgtgccaccaatagcaatacgccct
tctgtctttgtggatggtggaatgcagagtaatgagaatgacatcacagagaggctgaag
cgcattatccaagcaaattcaagtcttcgacaagaaatttccgatacaactcttccagct
agaagtctggctagttgggttgatctccaaatggaagttgcacagtacataaatagtgat
gtacgtggattgccaccacaaatgcaagcttccaggccactgagtggctttgttcagcgc
ctcaaaggaaagcaaggtcgtttccgtggaaatctgtcaggcaagcgtgttgaatatact
ggacgcactgttatttcacccgatccaaatcttaaaatcactgaggtagcaattcctatc
ttaatggctcgaattttaacatttcctgagcgtgtttcacgacacaacatagagaagttg
aggcaatgtgttcgcaatgggcccaacaaataccctggtgcgaagtatatcaggcatcct
gatggtaccgagatttcgttaatgtactctagtagaaagcgtcatgctgatgaattgaaa
tatggctacatagttgatcgtcatttggaagatggagatgctgttctatttaatagacaa
ccaagtttacatcgaatgtctatcatgtgccatcgggcaaggattatgccatggcgcaca
ttgagatttaatgaatctgtttgcaatccctacaacgctgatttgagatttaatgaatct
gtttgcaatccctacaacgctgattttgatggtgatgagatgaatatgcatgtaccacaa
acagtagaggctcgcacagaggctcttttgttgatgggggtccaaaacaatttatgcacc
ccaaagagtggggaaatcttggttgcttctacacaggattttctaacatcttcctttctc
attacaaggatggacacattttacgatcgtgcttcgttttcacttatgtgttcatacatg
ggcgatgcgatggatcacattgatttgccaactccagctttagttaagccagttgagctt
tggactggaaaacaattatttggtgtgcttctacgtccatatagtaaaatgagagtctac
ttaaaccttactcttaaggagaagagttacccgagagaaaaaggtctagaaaaaggtcta
gaaacaatgtgcccaagtgatgggtttgtttacttccgcaacagtgagctgataagtggg
caacttggaaaggccacactaggaaatggaaacaaggatggactttattctgtgctgcta
agggactataacacacatggtgctgcaatatgtatgaatcggcttgcaaagttgagtgct
cgttggatagggaatcatggattttcaattggcatcgatgatgtccaaccaggaaaggag
ttagttgaaaagaagacaatggaaatagagaaggggtatgggatatgtgaagcgtatata
gcttcatttaagaagggggaacttgaggatgcacctggctgtgatgctgcacagacactt
gaagccaatataacaaaggaactgaatgctatccgagtgaaaactgggcaagtgtgcact
gatacactacattggaggaatagccccttaattatgtcaaaatgtggttcaaaaggctca
gatatcaatattagtcagatggttgcatgtgtcggccagcaatctgttgggggttgtcgt
gctccaaatggattcatggaccggagtcttcctcattttgctacaaaatcaatatttcca
gctgctaaaggattcgtcgccagttcattttatgatggtttaagtgctactgagtttttt
ttccacactatgggtggaagagaaggccttgtagacacagcggttaaaactgctgacaca
gggtatatgtctcggcggcttatgaaggctctggaggatctttcaattttgtacgacaga
accgtgcgaaatgcaagttcatgcatagtgcaatttgagtatggtgatgatggtatggac
cctgcacagatggaagagaaagaagggcatcctctgaactttaatagattatttatgaaa
gttaaggcaacatgtcctcccggagaggaaaagagtctgtcatcatcagaaatccaacag
atggtgcataaaaggctttcagaacatgatacgactccagatggggggtgctcagcggcc
ttctgcaattcattaaaagaattcattgaaaacaactgtgtagcaagcttagagaaaaca
cggaaagatctcaaacttgatggggaacataatgcaggggaggatcttgatgctcttgaa
agtatcactttaaatatatcaggtgtaacaagaaagcaactacaggttttcctagagacc
tgcatctctcgttatcatgcaaagaaattagaagacggaacttcaattggtgcaatagga
gctcagagtattggagaaccagggacgcagatgacattaaaaactttccactttgctggt
gttgcaagcatgaatgttacactcggtgttcctcgcataaaagaaattataaatgcagcc
aaaaggatcagcacacctattattgaagcaaaactttcatgtgatgataatcaaaaattt
gctagaattgtaaagggtcgtattgaaaaaactcttcttggtcaggttgccaagagtatt
aagatagtgatggctgcgagagtagcatccatagttatagtgcttgatttggaagcaatt
caaacttcatgtctttccatagatgcttatattgtcaaggaatcaattttgcagactaaa
aaaattaagttgaaggaacagcacatcaaggttttagatcctggaaagctggaagttatc
cctcatgctgatcgaagtaaacttcattttgaactccaccgtctcaaaaataaacttcct
ggggttgttgtgaagggtatcaacactgttgaacgtgctgtgatcaacaaagacgaaaag
gaaaaggaaatgggaaaggaaaagtacaacttgcttgtggaagggactggtcttctagct
gttatgggcacagatggagttgttggatgtaatacaaaaaccaatcacatcatggaagtg
aatcaagtacttggaattgaagccgcaagacagggtataattggtgagattaagtatatc
atgaaacaacatggaatgactatagatgtacgtcacatgatgcttctagcagatctaatg
acttttaagggtgaagtattaggaattactagatttggtattcagaagatgaaagacagt
gtattgacattagcctcctttgagaagactgctgatcaccttttcaatgcttctgtaagt
gggcgggatgacaaaattgaaggagtcggtgaatgcatcattatgggcataccaatgcag
atgggcacagggatgcttaaagttatgcaaagcaacacttctcatccagttgagctgaat
tatggaaaagactcaattatccccagggacgactag
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integrated database retrieval system
