Ipomoea triloba (trilobed morning glory): 116012803
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Entry
116012803 CDS
T07384
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr00900
Terpenoid backbone biosynthesis
itr01100
Metabolic pathways
itr01110
Biosynthesis of secondary metabolites
Module
itr_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
116012803
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
itr01006
]
116012803
Enzymes [BR:
itr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
116012803
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
116012803
2.5.1.29 geranylgeranyl diphosphate synthase
116012803
Prenyltransferases [BR:
itr01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
116012803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
UbiA
Motif
Other DBs
NCBI-GeneID:
116012803
NCBI-ProteinID:
XP_031108334
LinkDB
All DBs
Position
3:5994561..5996196
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AA seq
363 aa
AA seq
DB search
MSLANPSTTWAKTHSFCGRFRSGSLIKSNEFRINLSFPSSIRKKPVFHSCSAILTKEQTD
VPQGESENKLDFKAYVLGKAESVNKALEAAVLLKEPLRVHESMRYSLLAGGKRIRPMLCI
AACEMVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVFGENVAVLA
GDALLSFAFEHIATATKGVSSEKIVRVIGELAKCIGAEGLVAGQVVDICSEGISDVGLEH
LEFIHLHKTAALLEASVVLGAVLGGGTEEEVAKLRKFARNIGLLFQVVDDILDVTKSSHE
LGKTAGKDLVADKVTYPKLLGLQKSREFAEQLNKEAQAQLSGFDQGKAAPLIALANYIAY
REN
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttgcaaatcctagcacaacttgggcaaagacccattctttttgcggcagattc
agatccgggtctctcataaaaagcaatgaattccgcataaatctctcgttcccgagctca
atcaggaaaaaaccggtgtttcattcttgctccgcgattctcaccaaggagcagaccgat
gttccccagggagaaagcgagaacaagcttgatttcaaggcgtacgtgttggggaaggcg
gaatcggtgaacaaggcgctggaagcggcggtgttgctgaaggagccgttgagggttcac
gaatcgatgaggtactctctcctcgccggcgggaagaggatccggccaatgctatgtatc
gccgcctgcgagatggtcggcggggatgaggccaccgccatgccggcggcctgcgcggtg
gagatgattcacaccatgtctctgatgcacgacgacctcccgtgtatggacaacgacgat
ttgcggcgagggaagccgacgaaccacaaggttttcggggaaaacgtggcggttctcgcc
ggggatgcgttgttgtcgtttgcctttgagcatatagccaccgcgacaaaaggggtttcc
tcggagaagatagtgagggttattggggaattggctaagtgcattggggctgaggggctc
gtggctgggcaggtagtggatatatgctcagaggggatctccgatgtgggattagaacat
ttggagttcattcatctccacaaaaccgcagctttgctggaggcttctgtggttctggga
gcggttctgggtgggggaactgaggaagaggttgctaaattaaggaaattcgcccgaaac
atcgggctgttgtttcaggttgttgatgacattcttgatgtcaccaaatcctcccatgaa
ttggggaagacagctgggaaggatttggttgctgacaaggtgacttatcctaagctgctt
gggcttcagaagtccagagagtttgctgagcagcttaacaaagaggctcaggctcagctc
tctggctttgatcaaggcaaggctgccccgttgatcgccttggccaattacattgcttac
cgggagaactga
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