Ipomoea triloba (trilobed morning glory): 116019111
Help
Entry
116019111 CDS
T07384
Name
(RefSeq) nuclear-pore anchor isoform X1
KO
K09291
nucleoprotein TPR
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116019111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
itr03019
]
116019111
Messenger RNA biogenesis [BR:
itr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116019111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
116019111
NCBI-ProteinID:
XP_031115066
LinkDB
All DBs
Position
5:complement(31277743..31296390)
Genome browser
AA seq
2044 aa
AA seq
DB search
MPLFLTDEEFERCSHDPILVAEKADAFIRQLYNQLETVKAQADAASITAEQTCSLLEQKY
VSLSSEFSALQSQQSQLNSSLDQRLSELAQLQADKHQLHLLSTGKDGEIERLSTEVSELH
KSKRQLMELLENKDLEISEKNATIKSYLDKIVTLSDNTASKEARLSDLESELARSQASCS
QLLQEKELIERHHTWLNDELTTKVNDLINLRKTHSKLEADMSVKLSDVERKFSESSRSLT
WYKDRVRELELKLASLEQELLSSKDAASRTEEQSSAEISTLNKLVELYKESSEEWSKKAG
ELEGVIKALEAHSNQIETDYKEKLEKEVSTRKELEEALASLKEKLATCEAELEKSKVESK
TMPLSSLSTELFVPSVPSTEMIEDDRWLVPSIPAGVSGTALAASLLRDGWSLVKIYTKYQ
EAVDALRHEQLGRKQSQAILERVLHEIEEKAGIILDEREEHERLVEGYSALDEKLKHSLS
EKATLESKIEDLKADLRRCERDYVVAQRENLDLQKQVTLLLKECRDIQLRCGSVEHKSVY
ENMAIAESDADNAESLLSFKDISGLVEQNAQLRSLVRNLTCQIETRELEWKDKFEKELQK
QIDDASSKVNAILARADEQGRMVESLHTSVAMYKKLYEEEHRLRTSDRKSPQDSTEDQRT
ETMILTESSQGVSQKAQEHRLERLKCIEDELVKLRTEVISLRSERDKSALEAQFAQGKLD
RFLKEFEHLREEHNAVLSRNVEFSQLIVDYQKKLRENSESCTAAEELSRKLKMEVSILKH
EKEILVRSEKRASDEVRSLSERVHRLQASLDTIQSTEEVREEARGAERRKQEEYIKHIEK
EWAEAKKELQEERNNVRNLTLVRENDLKSALRQVEEMGKELANSLHSLSMVESRAAVAEA
RAAGLEEKLQSSHTKISDIDGGSGPSSSSSEKIVADLCTAQEEIKNLREEVKFCKDHMLQ
YKSIAQANEEALKQMEQAHENFKVEADNMKNSLEEEILLLRKRAKELEGECDLRTKEAAS
ANAGKDEELAAAFSEIAHLKEDCCLKMSQIGVMEIQISSLKDDLEKEHQRWQAAQANYER
QVILQSETIQELTRTSQALASLQEETSKLHKMSDALKSENIELKAKWDAEKKELEELKSE
ADKKFNEVNEQNKILLSRLEAIHIKQAEKDRVSAGISSGTTATEIDDGLLNVVNYLRRSK
EIAETEISLLKQERLRLQSQLENALKAAETAEASYRAERDNSKALLYREEEFKGLQLQIR
ELNLLRESNLQLREENRHNFEECQKLRETAQKARSEADDLEKFLKDREHEVEAFRKEADI
QRMEKQHLEKRIDELVEKCKSFDMEDYERVREAVRQMQETLKEKDDQLEEIRKHVSERQE
LISKLEQDLARNRVELSQRESRINELLQAEATLRSELDKMKRSTNLQKKKFENLVKEKDE
LNKENQVLLKNLEEARQGRRNVGDAITEQALKEKEKEKDTRIQMLEKTLERHREELKREK
EEHRTEKARRLKTQRTCTESIETVKQQQSKLLDELEKHKQALKMFTDEGEKSRQPKGGQS
EGTSVDLLLAGTRLADFTAAYLQAVNNFEQVVQPICIEAGVSTAADISSGPEISLSSGPA
VSLVLPTSSTKTEDEREKRLVSSKMSSETRKTGRKLVRPRILKPEELHDDIEMQEVDATA
SSGKPLASHAVETQENPMPTSQPSVRKRPSATSTSELQEETPTSEEASTHMQPVLKKPKG
PETSQEGGEVKSVVNLVPESVLATEEYDVGDLTQGFKEEDDEKDEAGSAGEQGEDVSVDA
INHANLQNDRSDVVDDILDRSGVTAIQDDDQLNFQVQQDIHQTAIESGSEKEEGELVADI
TDIEGGSNLSMGSPDVEGQSEQTVTPENLTGVDEDPFINMASETGEVDSSRVLDDEKTDG
GEELVEVQDKMNDGSDRVMAETDQVPESVPTTSEKPSTSNNPVADLKEENPGIATDTEEA
TQSTVTSRSSTTINLMERARERARERQGQHTTLAHPSAPTRARGRLLRGRQVRGGRSGRG
QTPG
NT seq
6135 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgttcctgacggatgaggaattcgagcgttgctctcacgacccaattttggtt
gcggagaaggcagatgcattcatcaggcagctatacaaccaactggagacggtgaaggct
caggctgatgccgcctctatcaccgccgaacagacctgctccctactcgagcagaaatac
gtttctctctcttctgaattctccgctctccaatctcagcaatcccaactcaactcttct
ctcgatcaacgcctctccgaacttgctcaactccaagccgacaagcaccagcttcacctc
ctttctactggcaaggatggggagattgaacgcttgtctacagaggtatccgagcttcat
aaatcgaaaaggcaattgatggaattgttggagaacaaggatttagagatcagtgagaaa
aatgccaccatcaaaagctatctcgataagatagtcactttatctgataatactgcatca
aaggaagcacgattaagtgacttggagtctgaattagctcgctctcaagcttcctgttca
cagcttctgcaggagaaggaactaattgagaggcatcacacatggcttaatgacgagtta
actaccaaagtcaatgatctcataaaccttcgtaaaactcattccaaacttgaggcagac
atgtctgttaaactttctgatgtagagaggaagttcagtgaaagttctagatctttgaca
tggtacaaggacagagtaagggagctggagttgaagttggcatccttggagcaggagctg
ttatcatcaaaggatgcagcttctaggacagaggaacaatcatctgctgagatttctact
ttaaacaagcttgtggaactatataaagagagctcggaggagtggtctaaaaaggcaggg
gaacttgagggcgtgattaaggcattggaagctcattcaaaccaaattgaaactgactat
aaagagaagcttgagaaggaagtttcaacaaggaaagaattagaagaggcacttgcatct
ttaaaggaaaaacttgcaacttgtgaagcagagttggaaaaaagcaaggtagagagtaaa
acaatgcctctgagtagtttaagtacagaattgtttgtgccctcagttccatcaaccgag
atgattgaagatgatcgctggcttgtacctagtattccagctggtgtttcaggaacagca
ttggctgcatcacttcttcgtgatggttggagtctggtcaagatttacacgaaatatcag
gaagctgttgatgcattgcgtcatgagcaacttgggagaaaacaatctcaagctatcttg
gagcgggtacttcatgaaattgaggagaaagctggaatcatattggatgaacgagaggag
catgaaaggttggtggagggatactctgcactagatgaaaagctgaagcattctctttct
gaaaaagccactttagagagtaaaattgaagatttaaaggctgatttgcgaagatgtgag
cgtgactacgtagtagctcagagagagaatcttgacctccaaaagcaggttactttgctt
ttgaaggagtgccgtgatatacaactccggtgtgggtcagtggagcataaaagtgtctat
gagaatatggctattgctgaaagtgatgctgataatgctgaaagtctgttgagcttcaag
gatataagtggattagttgaacagaatgcccaattacggagtcttgttcgcaaccttact
tgtcagattgaaaccagagaattagagtggaaggataagtttgaaaaagagcttcagaaa
caaattgatgatgcttcgtccaaagtaaatgcaattttagcaagagctgatgagcaaggg
cgtatggttgagtcacttcatacatctgtggcaatgtacaaaaagttatatgaagaggaa
cataggcttcgcacttctgataggaaatctccacaagattcaacagaggatcaaaggaca
gaaacaatgattttgactgaatcgtcccagggggtgtcacagaaggcacaagagcataga
ctagagcgtcttaagtgcattgaagatgaactggtgaaattacggactgaagtaatatct
ttacgatcagagcgtgacaaatcagctttggaagcacaatttgcacaggggaaacttgat
agatttctgaaagaatttgaacacctgagagaggaacacaatgctgtcctttcaaggaat
gtggagttctcacagttgattgttgactaccaaaagaagctgcgtgaaaactctgagtca
tgtactgctgctgaggagctttcaagaaagttaaaaatggaggtttcaattcttaagcac
gagaaggaaattttggttcgttcagaaaagagagcgtctgatgaagttcgtagtttatct
gagagggttcaccgtttgcaggccagtttagatactattcaaagcactgaggaagttcgt
gaggaggctaggggtgctgagaggagaaagcaagaggaatatattaagcacattgagaaa
gaatgggctgaagctaagaaagagttgcaagaagagcgtaataatgtccgaaatcttaca
cttgtgcgggaaaatgatttgaagagtgcactgagacaagttgaagaaatgggaaaggaa
ttggcaaactccttgcattccctatctatggttgagtctagggctgctgttgcagaggca
cgggctgctggtttggaagaaaaattgcagtcttcacatactaagatctctgacatagat
ggtggaagtggtccttcatcctcttctagtgagaagattgttgcggacctgtgtactgcc
caagaggaaataaaaaatttgagagaagaagtaaagttttgcaaggatcatatgctgcag
tataaaagcattgctcaggcaaatgaagaggcattgaaacagatggaacaggctcatgag
aacttcaaagttgaggctgataacatgaagaattctcttgaagaggaaattttattgctt
agaaagcgggctaaggaacttgaaggtgaatgtgacttgaggactaaggaggctgcttct
gcaaatgctggaaaagacgaggaactcgcagctgccttttctgaaattgcccatcttaaa
gaagattgttgtttaaagatgtcccaaattggagtcatggagatacaaatttcttcattg
aaagatgatttggagaaagagcaccaaaggtggcaagctgctcaagctaattatgaaaga
caggtaattctgcagtcggaaactattcaagagttgacaagaacatctcaagctttggct
tcgctgcaagaagaaacatctaagctacataagatgtcagatgcactaaaatctgaaaat
attgaactgaaggctaagtgggatgcagaaaagaaagagcttgaagaattaaaaagtgaa
gctgataagaaattcaatgaggtcaatgaacagaacaaaatattgttgagtcggctcgag
gctattcacatcaagcaggccgagaaggatcgtgtttcggctggaattagttctggaacc
actgctacagaaattgatgatgggttactgaatgttgttaactatttaaggagatcaaag
gaaattgcagaaacagaaatctcattgctgaaacaggaaagactccgcctgcaatctcag
cttgagaatgctcttaaggcagcagagacagcagaagcatcatatcgtgctgaacgggat
aattctaaggccttattatatagagaagaggagtttaaaggcctacagcttcagattaga
gagttgaacttgcttcgagagagcaatttgcagcttagagaggagaacagacataatttc
gaagagtgccagaaactccgtgaaactgcccagaaagcaaggtctgaagcagatgatctt
gaaaagtttctcaaggacagagaacatgaggtggaagcttttaggaaggaggctgatatt
caaagaatggagaaacagcatcttgagaaaaggattgatgagttggttgagaagtgcaag
agctttgacatggaagattatgagcgtgttagagaagctgttcggcagatgcaggaaact
ctgaaggaaaaggatgatcagttggaggaaattaggaagcatgtctctgagaggcaagag
ttgatatcaaaactagagcaagaccttgcaaggaacagagtggaattgagccagagggag
tctagaataaatgagcttttgcaagctgaggccactttaagatctgaactcgataaaatg
aagaggtcaacaaatctacaaaagaagaagtttgagaatctagtgaaggaaaaagatgaa
ctgaacaaagagaaccaagttctgttgaagaatttggaagaagctcggcaagggagaaga
aatgttggtgatgctattactgagcaggctttaaaagagaaggagaaggagaaagacacc
agaatacagatgttggagaaaacattagaaaggcacagggaggagttgaagagagaaaaa
gaagaacataggacagaaaaagcaaggcgtttgaagactcaaaggacatgtacggagtcc
attgagactgtcaaacagcaacaatcaaagctattagatgaacttgagaagcataagcag
gctcttaaaatgttcacagatgagggtgagaagtcgaggcaacccaaaggtggtcagtct
gagggtacatcagtggatctgcttcttgctggaacccgattagcagacttcactgctgct
tatctccaggctgttaataattttgaacaagttgttcaacctatttgcattgaggctgga
gtttccactgctgcagacatttcttctggtccagagatttcattatcaagtggtcctgca
gtatctttagtgctaccaaccagttcgacaaaaactgaagatgaaagagagaagagatta
gtgtcgtcaaagatgagctctgaaacccgtaaaacagggaggaagctggtccgtcctcgt
atcctgaaacctgaagagcttcatgatgatatagagatgcaagaagtggatgcaactgcc
agcagtggaaagcccttggcttctcatgctgtggaaactcaagagaatcccatgccaaca
tctcagccatctgttcgtaagcgtccgtctgctacgtctacttcagagttacaagaagaa
actccgacttcagaagaagcaagcactcacatgcagccagtgctgaaaaagcccaagggt
ccagaaacctcacaggagggtggcgaagtaaaatctgtggttaatttagttcccgagtct
gttcttgctactgaagaatatgatgttggagatctgacccagggttttaaggaggaagat
gatgaaaaggacgaagcagggtctgcaggggaacagggtgaagatgtttcagtagatgca
ataaatcatgccaacttgcagaatgacagaagtgacgtggtagatgacattttggatagg
tctggtgtaacagctatacaggatgatgatcaattgaactttcaggtgcaacaagatatt
catcagacagcaatagaatctggaagcgaaaaggaagagggagagctagttgcagatatt
actgatattgaaggtggcagtaacctgtcaatgggaagtccagatgttgaaggccagtct
gagcaaacagtaacgcctgagaatttaactggtgtagatgaagatccctttattaatatg
gcctctgaaactggtgaggttgattcttctcgtgttcttgatgatgagaagactgatgga
ggtgaagaattagttgaagttcaagacaaaatgaatgatggtagtgatcgggtgatggca
gaaactgatcaggtcccagaaagtgtgccgactactagcgagaaaccatctaccagcaac
aatcctgttgcggacttgaaggaagagaatccgggtattgcaacagacacagaggaagca
acgcaatcaactgttactagcagaagctcaactacaattaatttgatggagagggcaagg
gaaagggcaagggagagacaaggacagcatactactcttgcacacccctctgctccgacc
agggcccgtggtagactacttcgaggtcgtcaagtacgtggtgggcgtagtgggcgtggg
caaacacctggttaa
DBGET
integrated database retrieval system
