Ipomoea triloba (trilobed morning glory): 116019457
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Entry
116019457 CDS
T07384
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
itr
Ipomoea triloba (trilobed morning glory)
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
itr03016
]
116019457
Enzymes [BR:
itr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
116019457
Transfer RNA biogenesis [BR:
itr03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
116019457
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
116019457
NCBI-ProteinID:
XP_031115526
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Position
5:complement(1067683..1072630)
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AA seq
615 aa
AA seq
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MEDIEDLLAGSGGGSPPGFRLPLTAAVVGVNPKQRKRSGLRKSTFPQDLPPSTANQTPKI
PGTETIYVKTFGCSHNQSDSEYMAGQLSAFGYALTDDPNEADLWLINTCTVKSPSQSAMD
TLLTRGRNAKKPLVVAGCVPQGSRNLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLT
RKTLPALDLPKVRKNEFIEILPINVGCLGACTYCKTKHARGHLGSYTVESLVGRVKNVVA
DGVKEIWLSSEDTGAYGRDIGVNLPILLNAIVSGLPSDGSTMLRIGMTNPPYILEHLKEI
ADVLRHPCVYSFLHVPVQSGSDAVLSAMNREYTVAEFRKVVDTLTELVPGMQIATDIICG
FPGETDEDFAQTVNLVRDYQLPQVHISQFYPRPGTPAARMKKVPSNVVKNRSRELTAVFE
SFTPYTGMEGKVERIWITDIASDGVHLVGHTKGYIQVLVVGPRSMLGSSAIVKITSVGRW
SVFGEVIEVLTQNNRDRNKARGSPCTNSHENCACSKEPESCACASTSCCQTETTVPKNDS
RQVDKQNANLIGWLLRKRKNHLHRKEAETVLHESKNIQGVSTSHATVTLSSGIVFGLLTL
IALLLFLGFMNLSSN
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggaagacattgaggatttgctcgcaggaagcggcggaggatcaccgcccggtttccgg
ctgccgctaacggcggcggtcgtcggagtcaatcccaagcagcggaagaggagtggtctc
cggaagtccacctttccccaagatttacccccgagtaccgccaatcagacccccaaaatc
ccaggcactgagacaatttatgtaaagacattcggctgttcgcataaccagagtgactcg
gaatatatggccggtcagctttctgcatttggttatgctttgactgatgaccccaatgag
gcagacctgtggctaataaacacctgcacagttaaatcccctagtcagtctgccatggat
actcttttaactagagggagaaatgcaaaaaagccactggttgtggcagggtgtgtgcct
caaggaagccgcaatttgaaagaactggaaggcgttagtatagttggggttcagcagatt
gaccgtgtggtagaagttgtggaagagactttgaaaggtcatgaagtccgccttctaacc
cgtaaaacattaccagcacttgacctgccgaaggtgaggaagaatgagttcattgagatt
cttccaattaatgttggatgtttaggtgcatgcacatattgcaagacaaaacatgcccgt
ggtcatttaggaagctacactgttgaaagtcttgtgggacgggtcaaaaatgttgttgct
gatggagtgaaggagatctggttgagtagtgaagacactggggcatatggtcgtgatatt
ggagttaatcttccaattctgttaaatgctatagtttctgggcttccctcagatggaagc
acaatgcttcgcattgggatgactaatcctccttatatccttgaacacttgaaggaaata
gctgatgttttgcgtcatccgtgtgtttactcttttcttcatgtacccgttcaatctgga
agtgatgccgtcttgagtgcaatgaatcgtgaatacactgtagcagagttcaggaaggtg
gtggatacattaactgaactagtccctggaatgcagattgccacagatataatatgtgga
tttcctggtgaaactgatgaagattttgctcagactgttaaccttgttagggattatcag
cttcctcaagttcatatatcacagttttatcccagacctggaactcctgctgcaaggatg
aagaaagttcctagtaatgtggtgaagaatcgaagtcgtgagttaactgctgtatttgag
tcgtttactccatatactggaatggagggcaaagttgaaaggatatggattacagatatc
gcttctgatggagttcacttggtgggacacacaaagggatacattcaggtgctggtggtt
ggtcctaggagcatgctgggatcctcggctatcgtaaagataacatcagtaggaagatgg
tcagttttcggagaagtgatcgaggtccttacccaaaataaccgggatagaaacaaagcc
agagggtctccttgcaccaactcacatgaaaactgtgcatgttccaaagagccagagtca
tgtgcctgtgcctcaacttcttgctgtcaaactgaaactacagttccaaagaacgactcg
agacaagtcgacaaacaaaacgcaaacctcattgggtggttgctcaggaagcggaagaac
catttgcatagaaaggaggccgagacagtactacatgaatctaagaacattcaaggagtg
tcaaccagtcacgctacggtcacgttatcaagtggaatcgttttcggtttattgacatta
atagcactattattgtttctgggcttcatgaatttgtcatccaactga
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