Ipomoea triloba (trilobed morning glory): 116030198
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Entry
116030198 CDS
T07384
Name
(RefSeq) DNA polymerase delta small subunit
KO
K02328
DNA polymerase delta subunit 2
Organism
itr
Ipomoea triloba (trilobed morning glory)
Pathway
itr03030
DNA replication
itr03410
Base excision repair
itr03420
Nucleotide excision repair
itr03430
Mismatch repair
itr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
itr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116030198
03410 Base excision repair
116030198
03420 Nucleotide excision repair
116030198
03430 Mismatch repair
116030198
03440 Homologous recombination
116030198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
itr03032
]
116030198
03400 DNA repair and recombination proteins [BR:
itr03400
]
116030198
DNA replication proteins [BR:
itr03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
116030198
DNA repair and recombination proteins [BR:
itr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
116030198
MMR (mismatch excision repair)
DNA polymerase delta complex
116030198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
116030198
NCBI-ProteinID:
XP_031128229
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Position
9:complement(8708237..8712860)
Genome browser
AA seq
444 aa
AA seq
DB search
MVAMEVDSKSNGILQRKQSLYKSLDESFQIHKLMYRGQQYSQIYFARLHLMRTLLYSLLP
NWKPHLPVCTVLGLKEGKECIIVGTLYKHMKLKPSVLDEYSKGRSATPLAESHNFVHSDD
YLVLEDESGRVKLSGSLLLPSTYVTGLVVALHGKETTAGDFLVEDVLEAGLAQQIEQPLQ
SDEDKYVVFISGLSVGSSTSNPLQFQLLIDHITGHLGDEKDQNIASQIVQVVIAGNSVEV
PSGLLNGQNLGSKDQSKLSEPIKELDILLTQIAAGIPLDIMPGPGDPANFAMPQQALHRC
LFPGSSTYNTFRSCTNPHCFELDNLRFLGTSGQNIDDLGKYSEAKDKLEFMERTLRWRHL
APTAPNTLGCYPFTDRDPFFIESCPHVYFVGNQDKYETRLIKGPEGQVVRLICIPKFAET
GVAVVLNTRNLECYTLSIGAQINL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccatggaagtggactcgaagagcaacggaatcctccagaggaaacagtctctc
tacaaatccttggatgaaagctttcagattcacaagttaatgtacaggggtcaacagtac
agccagatatattttgctagacttcacttgatgagaactctcctgtactctctcctccca
aattggaaaccccatttacctgtctgtactgttctgggattaaaggaagggaaagaatgc
attattgttgggaccctctacaagcacatgaagcttaaaccttccgttcttgatgagtac
tctaaggggagatctgctacaccgcttgcagagagtcacaattttgtgcactcggatgat
tatttagttttggaagatgagagtggaagagtcaaactgagtggcagtttgttattgcct
tcaacatatgtaacagggcttgttgtggcattacatggaaaagaaactactgctggtgat
tttctggttgaagatgttctagaggctggcctagcacaacaaatagagcaaccacttcaa
tcagatgaagacaagtatgtggtattcatctctggtttgagtgttgggagcagcacctcc
aatcctctacagtttcagcttttaattgaccatataactggacatttaggagatgagaag
gaccaaaatattgcatctcaaattgttcaagtagtcattgctggaaattctgtcgaagtt
ccaagtggacttctgaatggtcagaatttgggttcgaaggaccagtccaaattatctgaa
ccaatcaaagaactggatatcttgctgactcagattgcagctggtatacctttggatatc
atgcctggacctggtgatcctgcgaatttcgccatgccgcaacaggccctgcatagatgc
cttttccctgggtcatcaacatataatactttcagatcttgtactaatcctcattgcttt
gagcttgacaaccttagatttctaggaacttcaggtcagaacatcgatgaccttgggaaa
tattcagaagcaaaagataaacttgaatttatggagcgaacattgagatggaggcatctg
gcacccactgcaccaaatacccttgggtgttatcccttcactgatagggatcctttcttc
atcgaatcttgtccccatgtttattttgtgggcaatcaagataagtacgagactcgcttg
atcaaagggccagaggggcaggtggtaagactcatttgcattcctaaatttgccgagaca
ggcgttgctgtggtgttaaacacgagaaatcttgaatgctacactcttagcattggtgct
caaataaacttataa
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