Isoptericola variabilis: Isova_1470
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Entry
Isova_1470 CDS
T01520
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
iva
Isoptericola variabilis
Pathway
iva03030
DNA replication
iva03410
Base excision repair
iva03420
Nucleotide excision repair
iva03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
iva00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Isova_1470
03410 Base excision repair
Isova_1470
03420 Nucleotide excision repair
Isova_1470
03440 Homologous recombination
Isova_1470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
iva03032
]
Isova_1470
03400 DNA repair and recombination proteins [BR:
iva03400
]
Isova_1470
Enzymes [BR:
iva01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Isova_1470
DNA replication proteins [BR:
iva03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Isova_1470
DNA repair and recombination proteins [BR:
iva03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Isova_1470
NER (nucleotide excision repair)
GGR (global genome repair) factors
Isova_1470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
AEG44231
UniProt:
F6FUA3
LinkDB
All DBs
Position
1599088..1601802
Genome browser
AA seq
904 aa
AA seq
DB search
MTTTTRTGDRPRLLLIDGHSMAYRAFFALPVENFATHSGQPTNAVYGFTSMLINLLRDEE
PTHVAVAFDAGRQSFRTELLPSYKGTRESSPEPFKGQVPLIKDILAALHVPTLEREGYEA
DDIFATLATQAAAAGMEVLVCSGDRDAFQLVSDDVTVLYPKRGVSELTRMDRAAVVDKYG
VPPEQYPDLAALVGETSDNLPGVAGVGPKTAAKWITTYGSLEGLLDHVDELKGKAAENLR
AAVEQVRVNRRLNALLTDLELPVGPDDLAVQPWDRESVHQVFDALEFRVLRDRLFALAPE
GEVEPESGIDVDVADLEPGGLAAWLAGRAGRRLGLDVSGTPVPGAGDAWEVALADTTGGT
AAAVGLDLSELDPADEKALADWLADAAAPKAVHGAKAAWHMLAARGLDLQGVDFDTELAA
YLCYPDQRGYDLGDLVVRHLGRELRADDAAPVGAQGALDLALDGAGDDARSTRQAARAAA
VADLAGALSGQLADRGVEHLLHDVELPLSRVLARMEATGIAADVEYLEGLEQQFAAHVAR
SAAEAYDVIGREVNLGSPKQLQEVLFDELGMPKTKRIKTGYTTDAASLQDLYVKTGHPFL
EHLLAHRDASRLRQTVEGLLKSVAADGRIHTTFQQTIAATGRLSSAEPNLQNIPIRTEEG
RRIRRAFRVGEGYAELLTADYSQIEMRIMAHLSGDEGLIEAFRSGEDLHRYVGSRVFEVA
PEDVTPEMRSKIKAMSYGLAYGLSAFGLSQQLTIPTSEAQTLMDDYFTRFGGVRDYLTGV
VAEARATGYTATILGRRRYLPDLTSDNRQRRQMAERMALNAPIQGSAADIIKLAMLGVQR
ELDARGLASRLLLQVHDELVVEVAPGEREAAEEVLRTQMASAVDLDVPLDVSVGAGQTWH
DAGH
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccacgacgcgaaccggcgaccgcccgcgcctgctcctcatcgacgggcactcc
atggcctaccgggcgttcttcgccctgccggtggagaacttcgccacccactcgggccag
ccgaccaacgccgtctacggcttcacgtcgatgctcatcaacctcctgcgcgacgaggag
ccgacgcacgtcgccgtcgcgttcgacgccgggcgtcagtcgttccgcaccgagctcctg
ccgagctacaagggcacgcgcgagtccagcccggagccgttcaagggccaggtcccgctc
atcaaggacatcctcgcggcgctgcacgtgcccaccctcgagcgggagggctacgaggcg
gacgacatcttcgcgacgctcgcgacccaggccgccgcggccggcatggaggtgctcgtc
tgctcgggcgaccgcgacgcgttccagctcgtctccgacgacgtcacggtgctctacccc
aagcgcggcgtctcggagctcacgcgcatggaccgggccgccgtcgtcgacaagtacggg
gtcccgcccgagcagtaccccgacctcgcggccctcgtgggcgagacgagcgacaacctg
cccggcgtggcgggcgtcgggcccaagacggcggccaagtggatcacgacgtacggcagc
ctcgaggggctgctcgaccacgtcgacgagctcaagggcaaggcggccgagaacctgcgc
gccgcggtcgagcaggtgcgggtcaaccgccggctcaacgcgctcctgaccgacctcgag
ctgcccgtcggccccgacgacctcgcggtccagccgtgggaccgcgagagcgtgcaccag
gtcttcgacgcgctcgagttccgcgtcctgcgcgaccggctgttcgccctcgcgcccgag
ggcgaggtcgagcccgagtcgggcatcgacgtcgacgtcgcggacctcgagcccggcggg
ctcgcggcctggctggccgggcgcgcggggcgccggctcgggctcgacgtgtcgggcacg
ccggtgcccggggcgggcgacgcgtgggaggtcgccctcgccgacacgaccggcggcacc
gccgcggccgtcggcctcgacctgtccgagctcgacccggccgacgagaaggcgctcgcg
gactggctcgcggacgccgccgcacccaaggccgtccacggcgccaaggcggcgtggcac
atgctcgcggcgcgcggtctcgacctgcagggcgtcgacttcgacaccgagctcgcggcc
tacctgtgctaccccgaccagcgcgggtacgacctcggcgacctcgtcgtgcggcacctc
ggccgcgagctgcgcgccgacgacgccgcgcccgtcggcgcgcagggcgcgctcgacctc
gcgctcgacggcgccggcgacgacgcacgctcgacgcggcaggcggcgcgcgcggccgcg
gtcgccgacctggcgggcgcgctgtcggggcagctggccgaccgcggcgtcgagcacctc
ctgcacgacgtcgagctgccgttgtcgcgcgtcctggcgcgcatggaggccacgggcatc
gcggcggacgtcgagtacctcgaggggctcgagcagcagttcgcggcgcacgtggcccgg
tcggcggcggaggcgtacgacgtcatcggccgcgaggtcaacctcggcagccccaagcag
ctgcaggaggtcctgttcgacgagctcgggatgccgaagaccaagcgcatcaagaccggc
tacaccaccgacgccgcgtccctgcaggacctgtacgtcaagacggggcacccgttcctc
gagcacctcctcgcgcaccgcgacgcctcgcggctgcgccagacggtcgaggggctgctc
aagtcggtcgcggccgacgggcggatccacacgacgttccagcagaccatcgcggcgacc
ggccgcctgagctcggccgagccgaacctgcagaacatccccatccgcaccgaggagggg
cgccgcatccgccgggccttccgcgtgggggaggggtacgccgagctgctcacggcggac
tacagccagatcgagatgcggatcatggcgcacctgtcgggcgacgaggggctcatcgag
gcgttccgctccggcgaggacctgcaccggtacgtcggctcgcgggtcttcgaggtcgcg
cccgaggacgtcaccccggagatgcgctcgaagatcaaggccatgagctacgggctcgcg
tacgggctgagcgccttcgggctctcgcagcagctgacgatccccacgagcgaggcccag
acgctcatggacgactacttcacgcgcttcggcggcgtgcgggactacctcacgggcgtc
gtggccgaggcgcgcgccaccggctacaccgccacgatcctcgggcggcggcgctacctg
ccggacctcacgagcgacaaccggcagcgccgccagatggccgagcgcatggcgctcaac
gccccgatccagggcagcgccgccgacatcatcaagctcgcgatgctgggcgtgcagcgc
gagctcgacgcccgcgggctcgcgtcgcgcctgctcctgcaggtgcacgacgagctcgtg
gtcgaggtggcgccgggggagcgggaggccgccgaggaggtgctgcgcacccagatggcc
tcggccgtcgacctcgacgtgccgctcgacgtgtccgtcggcgcggggcagacctggcac
gacgccgggcactga
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