Jejubacter calystegiae: FEM41_14045
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Entry
FEM41_14045 CDS
T05975
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
izh
Jejubacter calystegiae
Brite
KEGG Orthology (KO) [BR:
izh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
izh03009
]
FEM41_14045 (rimO)
Enzymes [BR:
izh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FEM41_14045 (rimO)
Ribosome biogenesis [BR:
izh03009
]
Prokaryotic type
ribosomal protein modification factors
FEM41_14045 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Methyltransf_2
TRAM
Motif
Other DBs
NCBI-ProteinID:
QCT20684
UniProt:
A0A4P8YLY3
LinkDB
All DBs
Position
complement(3060021..3061346)
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AA seq
441 aa
AA seq
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MSNVNPAPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADLVIVNTCGFIDSAV
QESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHRYVPKP
QHNPYLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLESRAIGEVLAEAQR
LVESGVKELLVISQDTSAYGVDVKHRTGFWNGQPVKTSMVSLCEQLAKLGVWTRLHYVYP
YPHVDEVIPLMAEGKLLPYLDIPLQHASPRILKLMKRPGAVERTLERIRRWREICPDLTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGAGANSLPDQVPEEVKEERW
HRFMQLQQQISAERLQEKVGREIIVMIDEVDKEGATGRSMADAPEIDGVVWLNGERSVKP
GDVVRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtgaacccggcgccgaaaatcggttttgtctctctcggctgcccgaagaac
ctggtggattcagaacgtatcctgaccgagctgcgtaccgaaggctatgacgtggtgccc
agctatgacaatgccgatctggtgatcgtgaacacctgcggctttatcgacagcgcggta
caggagtcgctggaagccattggcgaagcgctgaacgagaacggtaaggtgatcgttacc
ggctgtctgggcgccaaagaggatcagatccgcgaagtgcatcccaaagtgctggagatc
accggtcctcacagttatgagcaggtgctggagcacgttcatcgttacgtgcccaaaccg
cagcacaacccgtacctgagcctggtgccggaacagggcgtcaaactgacgccgcgtcat
tacgcctatctgaagatttccgaaggctgcaaccatcgctgcaccttctgcattatccct
tccatgcgcggcgatctggaaagccgggccatcggcgaggtactggccgaagcccagcgt
ctggtggaatcgggggtcaaagagctgctggtaatctctcaggacacctcggcctacggc
gtggacgtgaagcaccgcaccggtttctggaacggacagccggtcaaaaccagcatggtc
agcctgtgcgagcagcttgcgaagctcggggtctggacccgcctgcactatgtctacccc
tatcctcacgtcgatgaggtgattccgctgatggccgaaggcaagctgctgccctatctg
gacattccgctgcagcacgccagcccgcgcattctgaagctgatgaagcgcccgggcgcg
gtagagcgtacccttgagcgtatccgccgctggcgtgagatctgcccggatctgaccctg
cgctccacctttatcgtcggcttcccgggtgaaaccgaggaggacttccagatgctgctt
gatttcctgaaggaagcgcgtctggatcgcgtaggctgctttaaatacagtccggtagaa
ggcgctggcgctaacagtctgccggatcaggtgccagaagaggtgaaggaagagcgctgg
caccgctttatgcagttgcagcagcagatctccgccgagcgactgcaggaaaaagtgggc
cgcgaaattatcgtgatgatcgacgaggtggataaagaaggcgctaccggtcgaagcatg
gcggatgcgccggagatcgacggcgtggtgtggctgaacggcgaacgcagcgtgaagccc
ggcgatgtggtgcgggtgaaggtagaacacgccgacgagtacgatctgtggggcagccgg
gtgtaa
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