Janthinobacterium sp. HH102: JAB4_003070
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Entry
JAB4_003070 CDS
T08624
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
jah
Janthinobacterium sp. HH102
Brite
KEGG Orthology (KO) [BR:
jah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jah03009
]
JAB4_003070 (rsmD)
Enzymes [BR:
jah01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
JAB4_003070 (rsmD)
Ribosome biogenesis [BR:
jah03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JAB4_003070 (rsmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_24
MethyltransfD12
Methyltrans_SAM
RsmJ
PrmA
Methyltransf_15
Methyltransf_4
Methyltransf_17
Methyltr_RsmB-F
SAM_MT
Methyltransf_16
Motif
Other DBs
NCBI-ProteinID:
QOU70914
UniProt:
A0A853SX78
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All DBs
Position
353133..353792
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AA seq
219 aa
AA seq
DB search
MQKKIKKPAKVPVHHAPPPNQVRIIGGQWKRSVLPVLQALGLRPTPDRVRETVFNWINHL
RDGDWANAQVLDLFAGSGALGFEAASRGAASVTMVDTHTPVIRQLEENKTKLRADNVQLL
RGDALLTAQGLAARGQRYDLIFLDPPYQQDFLAKVLPLCANLLREGGIVYAESGLPLVFD
EASALEKPEWMAPWEVIRADKAGTVYYHLLTYNKVPATA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaaattaaaaaacccgccaaagtccccgtccaccacgcgccgccaccgaac
caggtgcgcatcatcggcggccagtggaagcgctccgtgctgcctgttttgcaggcactg
ggcttgcgcccgacgccggaccgcgtgcgcgaaaccgtattcaactggatcaaccacttg
cgcgacggcgactgggccaacgcccaggtgctggacctgtttgccggcagcggcgcactg
ggcttcgaggcggccagccgcggcgcggcgtccgtcaccatggtcgatacgcatacgccc
gtgatccgccagctggaagaaaacaagacgaaattgcgcgccgacaatgtgcaattgctg
cgcggcgacgccctgctgacggcgcaaggcctggcagcgcgcggccagcgttacgacctg
atcttcctcgatccgccttaccagcaggatttcctggcgaaagtgttgccgctgtgcgcc
aacctgctcagggaaggcggcatcgtgtacgcggaatcgggcttgccgctggtcttcgat
gaagccagcgcactggaaaagcccgagtggatggcgccgtgggaagtcatccgcgccgac
aaggcgggcaccgtttattatcatttgctaacttacaacaaagtgccggcaactgcctga
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