Janthinobacterium sp. 17J80-10: EKL02_08935
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Entry
EKL02_08935 CDS
T05896
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
jaj
Janthinobacterium sp. 17J80-10
Brite
KEGG Orthology (KO) [BR:
jaj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jaj03009
]
EKL02_08935 (rimO)
Enzymes [BR:
jaj01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
EKL02_08935 (rimO)
Ribosome biogenesis [BR:
jaj03009
]
Prokaryotic type
ribosomal protein modification factors
EKL02_08935 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QAU34293
UniProt:
A0A410USM5
LinkDB
All DBs
Position
1957066..1958430
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AA seq
454 aa
AA seq
DB search
MSNASSPTPKVGFVSLGCPKALVDSEQILTQLRAEGYETAKSYDGADIVIVNTCGFIDAA
VQESLDAIGEALHENGKVIVTGCLGAKKDAAGDDIIQKVHPKVLAVTGPHALGEVMSAVH
LHLPKPHDPFSDLVPAQGVKLTPKHFAYLKISEGCNHRCSFCIIPSMRGDLVSRPIADVM
LEAENLFKAGVKELLVISQDTSAYGVDVKFRMGFWNGKPVKTHMTQLVTALGELAAQYGA
WVRLHYVYPYPHVDDIIPLMAEGRILPYLDVPLQHAHPDVLKRMKRPASGEKNIERITAW
RKMCPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAEIDRLGCFAYSPVEGATANQLANPV
PEEVREERRGRVMLLQEEISKKRMQAKVGKTMRVLIDEVEPTGGGVGRSAADAPEIDGVV
YVKRPFEPQKKLKVGEFVEVEITAADAHDLWAAA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgcatcttctcctacgccgaaagtcggctttgtttcccttggctgtcccaag
gcgctggtcgattccgaacaaatcctgacgcaattgcgcgccgaaggctacgaaaccgcc
aagtcctatgacggcgccgacatcgtgatcgtcaatacctgcggcttcatcgatgccgcc
gtgcaggagtcgctggatgccatcggcgaagcactgcatgaaaacggcaaggtcatcgtc
accggatgccttggcgccaagaaggatgccgccggcgacgacatcattcagaaagtgcat
cccaaggtgctggccgtcaccggcccgcatgcccttggtgaagtcatgagcgctgtgcac
ctgcacctgcccaaaccgcacgacccgttcagtgacctggtgccggcgcagggcgtgaaa
ttgacgcccaagcatttcgcctacctgaaaatttccgaaggctgcaaccaccgctgcagc
ttctgcatcatcccgtcgatgcgcggcgacctggtgtcgcggccgatcgccgacgtcatg
ctcgaagcggaaaacctgttcaaggccggcgtcaaggaattgctggtgatttcgcaagac
accagcgcctacggcgttgacgtcaagttccgcatgggcttctggaacggcaagccggtc
aagacccacatgacgcagctggtcaccgcgcttggcgaactggctgcgcaatatggcgcc
tgggtgcgcctgcactacgtctacccgtacccgcacgtcgacgacatcattccgctcatg
gccgaaggccgcatcctgccgtacctggacgtgccgctgcagcatgcccatccggatgta
ttgaagcgcatgaagcgtcctgccagcggcgaaaaaaatatcgagcgtatcaccgcctgg
cgcaagatgtgcccggacctgaccatccgctcgaccttcatcgccggcttccccggcgag
accgaagccgagttcgaatacctgctggattttctgaaggaagccgaaatcgatcgcctc
ggctgcttcgcctattcgcccgtggaaggcgccaccgccaaccagctcgccaacccggtg
ccggaagaagtgcgcgaggagcggcgtggccgcgtcatgctgctgcaggaagaaatttcc
aaaaaacgcatgcaggccaaggtcggcaagaccatgcgcgtgttgatcgatgaagtcgag
ccgactggcggcggcgttggccgttcggcagccgacgcgccggaaatcgatggcgtggtg
tacgtcaagcgacctttcgagccgcaaaagaagctgaaggtcggcgagttcgtcgaggtg
gaaatcaccgccgcggatgcgcatgacttgtgggcggcagcataa
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