Jannaschia sp. CCS1: Jann_3617
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Entry
Jann_3617 CDS
T00330
Name
(GenBank) lysyl-tRNA synthetase
KO
K04566
lysyl-tRNA synthetase, class I [EC:
6.1.1.6
]
Organism
jan
Jannaschia sp. CCS1
Pathway
jan00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
jan00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Jann_3617
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
jan01007
]
Jann_3617
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jan03016
]
Jann_3617
Enzymes [BR:
jan01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Jann_3617
Amino acid related enzymes [BR:
jan01007
]
Aminoacyl-tRNA synthetase
Class I (A)
Jann_3617
Transfer RNA biogenesis [BR:
jan03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Jann_3617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1f
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1b
tRNA-synt_1e
tRNA-synt_1c
Motif
Other DBs
NCBI-ProteinID:
ABD56534
UniProt:
Q28L78
LinkDB
All DBs
Position
complement(3689164..3690810)
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AA seq
548 aa
AA seq
DB search
MTDLRDAAMTSKAWPFEEARRVLKRYEKAPPEKGYVLFETGYGPSGLPHIGTFGEVLRTT
MVRRAFEVISDIPTKLISFSDDVDGMRKVPGNVPNRGMMAEHLQRPLTSVPDPFGTHESF
GHHNNAMLRRFLDTFGFEYDFISATEFYASGQFDEILKLAVERYDDIMKVMLKSLRDERQ
QTYSIFLPIHPETGRVLYVPMKSVNSADHTITFDDEEGREWTLPVTGGHVKLQWKPDFGA
RWAALGVDFEMFGKDHSTNAPIYSRICEILGTKAPETYSYELFLDEHGQKISKSSGNGIS
IDEWLTYASTESLSYFMYAKPKTAKRMHFDVIPKAVDEYHQQLRAYADQDTAKRLANPVF
HIHGHNVPASTMVVPFAMLLNLASVSGAEEKEKLWGFINRYAPDASPEKNPDLDQAAGFA
IRYYNDFVKPTRQFRAATDQERAAMEELVVCLRDAEKALDVIARKNAQEGKDMPLPAVNW
QDDEFLQSIVFAIGKTHGFDPLRAWFSGLYEVLLGASQGPRFGGFIALYGIDETVKLIED
GLAGRLIG
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctgcgcgacgctgcgatgacctccaaggcctggccctttgaagaggcgcgg
cgcgtgttgaaacggtatgagaaagccccgcccgaaaaaggctatgtgctgttcgagacg
ggctatggcccctccggtctgccgcatatcggcacattcggcgaggtgttgcgtacaaca
atggtgcgccgcgcgttcgaggtgatttcagatatccccacgaagctgatttccttctcc
gatgacgtggacggtatgcgtaaggtgccgggcaatgtgccgaaccgcggcatgatggcc
gagcatttgcaacggccgctgacgtccgtgcctgatccgttcggaacgcacgagagtttt
ggccaccacaacaacgccatgctgcgccgattcctggacacgttcgggtttgaatatgac
ttcatctcagccacggaattctacgcgtccggccagtttgacgagatcctgaagcttgcc
gtggaacggtatgatgacattatgaaggtcatgctgaagtccctgcgcgatgagcgtcag
cagacctattcgatctttcttcccatccatcctgaaaccgggcgggttctgtatgtgccg
atgaagtctgtcaactcagcggaccacacgatcaccttcgatgacgaggagggtcgtgaa
tggacgctgcctgtcactggcggccatgtgaagttgcaatggaagccggacttcggggcg
cggtgggctgcgttgggtgtcgattttgagatgtttggcaaagatcactcaaccaatgcg
ccgatttactcgcgcatttgcgagatcctcgggacgaaagcgccggagacctactcctac
gagctgtttctggatgaacacggccagaagatctccaaatcctcgggcaacgggatcagt
atcgacgaatggctgacctatgcctcgacggaaagcctgtcctatttcatgtacgccaag
cctaagacggccaagcggatgcacttcgatgtgatcccaaaggccgtcgatgaataccac
cagcaattgcgtgcttatgcagatcaggacacggccaagcggttggccaacccggtcttc
catatccacgggcacaatgtgcctgcctccacgatggtggtgccgtttgcaatgcttctg
aacctcgccagtgtctcgggcgcggaggagaaagagaagctgtgggggttcatcaaccgc
tatgcgcccgacgccagtcccgaaaagaaccccgatctggatcaggcggcaggtttcgcg
atccgctactacaacgatttcgttaagccaacgcgtcagttccgggccgccactgatcag
gaacgcgccgcgatggaagagttggttgtgtgtttgcgcgatgcagagaaagcgctggac
gtgattgcgcgcaagaatgcgcaggagggcaaggacatgccactgccagcggtcaattgg
caggatgacgaattcctgcagagcattgtctttgccatcggcaaaacccacggctttgac
ccgctgcgcgcgtggttctctggcctgtacgaggtgcttctgggcgcgtcccagggccca
aggttcggggggtttatcgcgctctatgggatcgatgagacggtgaaactgattgaggat
ggcttggcagggcgattgatcggctga
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