Jatropha curcas (Barbados nut): 105631254
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Entry
105631254 CDS
T03922
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2 isoform X1
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
jcu
Jatropha curcas (Barbados nut)
Pathway
jcu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jcu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105631254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jcu03021
]
105631254
Enzymes [BR:
jcu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
105631254
Transcription machinery [BR:
jcu03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
105631254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
105631254
NCBI-ProteinID:
XP_012068704
LinkDB
All DBs
Position
Unknown
AA seq
1179 aa
AA seq
DB search
MAQKKQISGAAMGDFRELQELAKHHIDSFDYMVERGLEVMLDNIKPVEIHDSFTNTSLKL
YLSNPKVYEPVREALRTKIKRLLPFECRQAKVSYCGKFEADVCFEYRGRPVIREKYNFGQ
LPIMLKSRLCHLYGADSQKLVSMKEESSEMGGYFILNGLERVVRCLIMPKRNYPMSMVRG
SFRDRREGYTDKAVVIRCVREYQSSLTDQSSVTVKLYYLRSGSARLGFWIQGREYLLPVG
IVLKALAETTDWEIYEKLTCCFDEKYDKTKGAVGSQFVGERAKIILDEVRGLSLFTQTEC
LRHIGEHFQPVMDGLEKESFSNVAHAVLKDYVFVHLTNYDDKFNLLIFMLQKLFSLVDKT
SVEDNPDSLQNQEILLPGHLITIYLKEKLEEWLRKAKKVIQEEIEKNKKLNFLSVSDVKK
VMDKNHSSSVSLAVENLLKTGRLITQTGLDLQQRAGYTVQAERLNFLRFLSFFRAVHRGA
SFAGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTRSCRVTSYFDSHGAVKDFFDM
RKSILGVLTGLGMISSLPKLVQAGPPQVLSVLLDGRVVGSIPSSEVEKVVAHLRRLKVSA
ASMIPDDLEVGYIPLSMGGAYPGLYLFTSPSRFIRPVRNISIPADDSRNIELIGPFEQVY
MEIRCPDGGNGGRSDAFPATHEEIHPTDMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMA
FSLQSLRFRADQKLYHLQTPQTPIVRTSAYTKYCIDEYPTGTNAIVAVLAYTGYDMEDAM
ILNKSSVERGMFHGQIYQTETIDLSEEGSKSARAQKMFRRSNIDRSWHSVIDSDGLPYIG
QMIHPNEPYCSIYDEVTNTTKTNNRKGSDPVFVDYVAVDTKNKNNIQKVNIRFRHPRNPI
IGDKFSSRHGQKGVCSQLWPDIDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESLAAKG
GSLNGKFVDATPFANSVKKAEGGDNKSDSESLVDDLGEMLRSHGFNYHGVEVLYSGVYGT
ELACEIFIGPVYYQRLRHMVSDKFQVRSTGVVDQVTRQPIKGRKRGGGIRFGEMERDAML
AHGAAYLLHDRLHTCSDYHIADVCSICGSILTSSFVQTQKRVVRDIGGLPPVRAPKKVAC
HACQTSKGMETVAMPYVFRYLAAELAAMNIKMTVQLSGA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaagaagcaaatatcaggtgcagcaatgggagacttcagggagttacaagag
ctagcaaagcatcacatagattcattcgattatatggtggagagaggattggaagttatg
ttggataatatcaagcctgtcgaaattcatgattccttcaccaacaccagtctcaaattg
tacttgagtaatcctaaagtgtacgagcctgtaagggaagctttgagaacgaagattaaa
cgtttacttcctttcgaatgtcgacaggcgaaggtttcttattgtggaaagttcgaggca
gatgtttgcttcgagtatcgtggcagaccggtaataagagaaaagtataatttcggtcag
cttcctatcatgttaaagtcaaggctctgtcacttgtatggtgctgattctcaaaaattg
gtttccatgaaggaagagtcatccgagatgggcgggtacttcattttgaacgggcttgag
agagttgttcgatgtctaataatgccaaagcggaactatccaatgagtatggtgcggggt
tcttttcgtgatcggcgggaaggatacactgacaaagctgtcgtcataaggtgtgtacga
gaataccaatcctcattaacagaccaatcttcagtaacagttaaattgtattacctccgt
agtggaagtgcaagacttggattttggatacaaggaagggagtacttgcttcctgttggc
attgttctgaaggcacttgctgagactactgactgggaaatttatgagaagttgacatgt
tgctttgatgagaaatatgataagacaaagggagctgttggctctcagtttgtgggtgaa
agggcaaaaattattcttgatgaagttcgaggcttatctcttttcactcagactgaatgt
ctgcggcatattggggagcacttccaacctgtcatggatgggctggaaaaagaaagtttc
tctaatgttgcccatgcagttctaaaagattatgtatttgtccatcttactaattatgat
gacaagttcaatttgctcatcttcatgttgcagaaactgttctctcttgtagacaagact
tctgtggaagacaacccagactccctgcaaaatcaggagatcttacttcctggacacctc
attaccatttatctcaaggagaaactagaagagtggcttcgtaaagcgaaaaaagttatt
caagaagagattgaaaaaaacaagaagctcaattttttgtcagtttcagatgtcaagaag
gttatggataagaatcattcgtcatcagtcagtttagctgtggagaatttgctgaaaact
ggtagactgataacacaaacgggcctagatttacagcagagggctggttacacagttcaa
gcagagaggctcaattttctacgttttctttcttttttccgtgctgtgcatagaggggct
tcctttgctggattgcgtacaacaagcgtgcggaagttgctacctgaatcttggggtttt
ctttgccctgtccatacacctgatggggaaccatgtgggttgctcaaccatatgactcgt
tcttgtcgagttacttcatactttgattcgcatggagctgttaaagatttttttgacatg
aggaagtctatcctcggcgttttgactggtctcggaatgatttcttcgttgccaaagctt
gttcaagctgggcctcctcaagttctttctgttcttttagatggtcgtgtcgttggctcc
ataccttctagtgaagttgagaaagttgttgctcatttacgaagattaaaagtgtcagct
gcttcaatgattcctgatgatctggaagtcggatatattcctttgagcatgggtggtgca
tatcctggtttatacctattcacatctccttccagatttattcgtccagtgagaaatatt
tctattcctgctgatgacagtcgaaacattgaacttattggaccatttgaacaggtgtac
atggaaataagatgtccagatggtggcaatggtggaagaagtgatgcatttcctgctact
catgaagaaattcatcctactgatatgctgagtgtggtggctaacctaactccatggtcg
gaccacaatcaaagtccccgaaatatgtaccagtgtcagatggcaaaacaaacaatggct
ttctctttacaatctcttcgcttccgagcagatcaaaagctataccatcttcagactcct
caaactcccattgttcgcacaagtgcatatacaaagtactgtatagatgagtatccaaca
gggactaacgcaatagttgcagtgcttgcttatacaggatatgatatggaggatgccatg
attctaaacaagtcatctgttgaacgtggaatgttccatgggcaaatctaccagacagag
actattgacttatctgaagaaggcagtaagtctgcccgagcccaaaaaatgtttaggaga
agtaacattgataggtcatggcactcagtgatcgattcagatggacttccatatattggc
cagatgatacatccaaatgaaccgtattgtagcatttatgatgaagtaacaaatacaacg
aaaaccaataatcggaaaggttcagatcctgtttttgttgactatgttgctgttgataca
aaaaacaagaacaacattcagaaggtgaacatacgctttcgacatcccagaaaccctatc
attggtgataaatttagtagcagacacgggcagaagggtgtttgctctcaattatggcca
gacatcgacatgccattttctggagctactggaatgcgtcctgatctgattatcaatccc
catgcatttccttcaagaatgacaattgctatgcttttggaatctcttgctgctaagggg
ggtagtttaaatggaaaatttgtggatgctacaccttttgccaattcagttaaaaaagct
gaagggggagacaacaagtcagattctgaatctcttgttgatgaccttggtgaaatgctt
agatctcacgggtttaactaccatggtgtagaggtgctttacagtggggtttatggaaca
gaactcgcatgtgaaatatttattgggcctgtttattaccagcgccttcgtcacatggta
tcagacaaatttcaggtgcgatcaacgggagttgttgaccaagtcactagacaacctatt
aaaggaagaaagcgtggtggaggtatccgtttcggagaaatggaacgagatgccatgctt
gctcacggggcagcatatttgttgcacgataggctccacacatgttctgattatcacatt
gccgacgtgtgttctatatgtggaagcatactcacatcatcattcgtccagacacaaaag
cgggtggttagggatattggcggcttacccccagtgagggctcccaaaaaagtggcttgc
catgcatgccaaacaagtaaaggtatggaaactgttgcgatgccttacgtcttccgatat
ttggctgccgaattagcagctatgaacataaaaatgactgtccagctaagtggagcttga
DBGET
integrated database retrieval system
