Jatrophihabitans cynanchi: M6B22_01555
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Entry
M6B22_01555 CDS
T09893
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
jcy
Jatrophihabitans cynanchi
Brite
KEGG Orthology (KO) [BR:
jcy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jcy03009
]
M6B22_01555 (rimO)
Enzymes [BR:
jcy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
M6B22_01555 (rimO)
Ribosome biogenesis [BR:
jcy03009
]
Prokaryotic type
ribosomal protein modification factors
M6B22_01555 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WAX57466
LinkDB
All DBs
Position
complement(325802..327199)
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AA seq
465 aa
AA seq
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MPSPSRSVALVTLGCARNEVDSEELAGRLGAGGWTVTDGDDADVVVINTCGFIDSAKKDS
IDTVLAAAESGKKVVAVGCLAERYGAELAASLPEADAVLGFDSYADIAARLDDLAAGRPV
PAHTPRDRRTLLPVAPAHRPAAVAEVAVPGHAWLPSGMARKRLDDSPTAYLKLASGCDRR
CSFCAIPSFRGSFVSRPQQDLLGEARWLAESGVRELVLVSENSTSYGKDLGDLRALESLL
PDLAAVDGIERIRVSYLQPAELRPSLLAAIAGTPGVAPYFDLSFQHASAPVLRRMKRFGS
TEAFLQLLGRVRELVPDAGARSNVIVGFPGESEADVAELERFLTGARLDVVGVFGYSDED
GTQAATYDGKLDAAEIAARVEQVSALAEELMSQRAEDRLGTRVEVLVESVVDGELVGRAV
HQGPDTDGTTTLTAGSNAARGRIVPALVTATEGIDLIARPDGQPW
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtccccctcccgctccgtcgccctcgtcaccctgggctgtgcccgtaacgaggtc
gactccgaggagctggccgggcggctcggggccggtggctggactgtgaccgacggggac
gacgccgacgtcgtggtgatcaacacctgtgggttcatcgactcggccaagaaggactct
atcgacaccgtgctcgctgcggccgagagcggcaagaaggtggtcgccgtcggttgcctc
gccgagcggtacggcgccgaactggctgcctcgctgccggaggcggatgcagttctcggg
ttcgactcgtacgccgacatcgcggcgcgattggacgatctcgccgccggacgtccggta
cccgcgcacacaccgcgggatcgccgcaccctgctgccggtggccccggcgcaccggccg
gccgcggtggcggaggtggccgtccccggacacgcctggctgccttcgggaatggcccgc
aagcggctggacgactcgcccaccgcgtacctcaagctcgcctccgggtgcgaccggcgc
tgctcgttctgcgcgatcccctctttccgcggctcgttcgtctcgcggccgcagcaggac
ctgcttggcgaggcgcgctggctcgccgagtcgggtgttcgcgaactggtgctggtgagc
gagaactccacgtcctacggcaaggatctcggcgacctgcgggcgctggagtcgctgctg
ccggatctggccgccgtcgacggcatcgagcgcatccgcgtctcctacctgcagccggcc
gagctgcggccatcgctgctggccgcgatcgccggaacgccgggcgtcgcgccctacttc
gacctgtccttccagcacgccagcgcgccggtgctgcgccgaatgaagcgcttcggctcg
accgaggcgttcctccagctgctcggccgggtgcgggagctcgtcccggacgcaggggcg
cgcagcaacgtcatcgtcgggttccccggcgagtccgaggccgacgttgccgaactcgag
cggttcctgaccggggcgcggctggacgtggtcggtgtgttcggctactccgacgaggac
ggcacgcaggccgccacctacgacggcaagctggacgcggccgagatcgcggcccgcgtc
gagcaggtgagcgcgctcgccgaagagctgatgtcccagcgcgccgaggaccggctgggt
acccgcgtcgaggtgctggtcgagtccgttgtcgacggcgagctcgtcggtcgagccgtc
caccagggccccgataccgacggcacgacaacgctcaccgccggatcgaacgccgcgcgc
ggccggatcgtgccggccctggtcaccgcgacggagggcatcgacctgatcgcccgtccg
gacggccagccgtggtga
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