Jeotgalibacillus malaysiensis: JMA_17180
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Entry
JMA_17180 CDS
T03570
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
jeo
Jeotgalibacillus malaysiensis
Pathway
jeo03030
DNA replication
jeo03430
Mismatch repair
jeo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jeo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMA_17180
03430 Mismatch repair
JMA_17180
03440 Homologous recombination
JMA_17180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jeo03032
]
JMA_17180
03400 DNA repair and recombination proteins [BR:
jeo03400
]
JMA_17180
Enzymes [BR:
jeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMA_17180
DNA replication proteins [BR:
jeo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMA_17180
DNA repair and recombination proteins [BR:
jeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMA_17180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NII
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
RNase_H_2
FtsK_alpha
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
AJD91035
UniProt:
A0A0B5AL71
LinkDB
All DBs
Position
1600759..1605066
Genome browser
AA seq
1435 aa
AA seq
DB search
MSTDLSKKEKFRLLLTQLNMTGDLYADHFEEAEIEKLAVHKKEKKWHFVFNLRSVVPCQI
MKDFTTRLNQSFSHIAQVSFTVKLANTDIPADTVLDYWETCLEELQGIAPPLLNLLTVQK
PEVNGNKITIKVSNETEGMQIKNKYADILNSAFEKWGFGPFVLHTEVSTEGSNEEYEAFV
ESKKKEEEEWAKQALVEMQKLEEQKNAAETHTGPVAIGYSIKPDEPVAIKTIQEEERKIA
IQGLVFDAEVKELRSGRSLLTFKVTDYTDSILVKMFSRDKEDAAIMQQLKKGMWVRAKGS
IQNDTFVRDLVMIAQDVMEIQPLLRQDTSEEKRVELHLHTPMSQMDAVSSVSSLVSQAKK
WGHKAVAITDHAVAQSYPEAHAAGAKNDIKILYGLEANLVDDGVPIAYNTSNRELETASY
IVFDVETTGLSAVYDKIIELAAVKVKEGEIIDRFERFANPHHPLSATTINLTGITDDMVR
NAPEIEDVLADFKEWCGDDILVAHNASFDMGFLNVGYKRAGMEKAPNPVIDTLELARFLH
PEFKNHRLNTLAKKFDVDLTQHHRAIYDAEATGYILARLLKEAKEKAILNHNQLNDYMGE
GDAFKRARPNHITILAQTQAGLKNLFKLISISHLEYFYRVPRIPRSLLNKHREGLLIGSA
CDKGEIFEGMMQKSPEEVEELADFYDYIEVQPPAAYQHLIDLELVRDEDNLKEIITKVVD
FADKMNIPAVATGNVHYVNEEDKIYREILIASQGGANPLNRHKLPDVHFRTTNEMLDAFS
FIGKEKAREIVIDNTNKIADMIEDVTPIKDELYTPKIEGADEEMREMSYGMAKSIYGEEL
PEIVEARLEKELKSIIGHGFAVIYLISHKLVKKSLIDGYLVGSRGSVGSSFVATMTEITE
VNPLPPHYVCPKCKESEFFNDGSVGSGFDLDDKDCPKCEVPYIKDGQDIPFETFLGFKGD
KVPDIDLNFSGEYQPVAHNYTKVLFGEDYVYRAGTIGTVADKTAFGYVKGYAGDHNLHFR
GAEVERLAGGCTGVKRTTGQHPGGIIVVPDYMDIYDFTPIQFPANASESEWKTTHFDFHS
IHDNLLKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPEVMKIFSGTESLGVTEEQIMCK
TGTLGIPEFGTRFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIHNGICELSDV
IGCRDDIMVYLIYQGLEPSLAFKIMEFVRKGKGLSPEWEEEMKNNGVPDWYIDSCKKIKY
MFPKAHAAAYVLMAVRIAYFKVHHPILYYAAYFTVRAEDFDLEAMAAGSQAIKAKIEAIN
AKGLDAAPKEKSLLTVLELCLEMVERGYTFKQVDLYKSDAKEFKIEGNSLIPPFNAIPGL
GTNAAINIVEARKNGEFLSKEDLQKRGKVSKTIIEYLDSQGCLAGLPDQNQLSLF
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgagtacagatttgtcaaaaaaagaaaagttccggctgttattaactcaactgaatatg
actggggatctgtatgcagatcattttgaagaagcagaaattgaaaagcttgcagtccac
aagaaagaaaaaaagtggcattttgtttttaatctgaggtcggttgtcccgtgtcagatc
atgaaggactttaccacgagacttaatcagtccttctcacatattgcgcaggtttcattc
acagtcaaacttgctaatactgatattcctgcagataccgtgctcgattactgggaaaca
tgtctagaagagctgcagggcatcgcaccaccattacttaatttgttaactgtgcaaaag
cctgaagtaaacggcaacaaaattacgattaaggtatctaatgagactgaaggaatgcag
attaaaaataaatatgctgatattttaaacagtgcatttgaaaaatggggattcggtcct
tttgttcttcatacagaggtttcgactgaagggtctaatgaagaatatgaagctttcgtt
gaatccaagaaaaaagaagaagaagagtgggccaagcaggcgcttgttgagatgcagaag
cttgaagaacagaaaaatgcagctgaaacccacactggtcctgttgcaatcggttattct
attaaacctgatgaacctgtagcaatcaaaacgatccaggaagaagagcggaagattgcg
attcagggacttgtgtttgatgcggaagtaaaagaattgagaagcggaagatcactgctt
acttttaaagtgacagactatacagattcaattttagtaaagatgttctcacgtgataaa
gaagatgcggcaattatgcagcagttgaaaaaaggaatgtgggtcagagcaaaaggatcc
attcagaatgatacatttgtcagagaccttgttatgattgcgcaggatgtaatggaaata
cagccgttgcttagacaggacacatcagaggaaaaacgggttgagctgcaccttcatacg
ccaatgagtcagatggatgcagtatcatcagtgtcttctctggtctcccaggcaaaaaaa
tggggacataaagccgttgcgattactgatcatgctgttgctcagtcttatccagaagcc
catgctgcaggcgcaaaaaatgatattaaaatcctgtatggattagaagcgaacctggtg
gatgacggtgttccgattgcctacaacacttcaaacagagaacttgaaacagcatcatat
attgtctttgacgttgagacaaccggcttatcagcggtatacgataaaattatagagtta
gctgctgtgaaagtgaaagagggagaaatcattgaccgctttgagcgttttgccaaccct
catcatccactttcagcaacgaccattaacttaaccggtatcacagatgacatggtgaga
aatgcaccggaaatagaagatgtacttgcagattttaaagaatggtgcggggatgatata
ttagttgcccacaatgcatcgtttgatatgggctttttaaatgtaggttataaacgtgcg
ggtatggagaaagctccgaatcccgttatagatacgcttgaacttgcaagatttcttcac
ccggaatttaaaaatcaccgtttaaatacgcttgcaaagaaattcgatgtggatcttaca
cagcaccaccgtgcgatttatgatgcggaagcgacaggatatattcttgctaggctgctg
aaggaagcaaaagaaaaagccattttaaatcataatcagctgaatgattatatgggtgag
ggagatgcattcaaacgcgcaagaccaaatcacattaccattctcgctcagacacaggcc
ggtcttaaaaacctgtttaagcttatatctatttctcacctggagtacttctaccgggta
ccgcgtattccaagatcactgcttaataaacatagggaaggccttctgatcggttcggca
tgtgataagggagaaatttttgaaggcatgatgcaaaaatcacctgaagaagttgaagag
cttgcagatttctatgactacattgaagtgcagccaccagctgcctatcagcatctcata
gatttagagcttgtcagagacgaagataatctgaaagagattattacaaaggttgtagac
tttgcggacaaaatgaatattcctgcagttgcgaccgggaatgtacattatgttaatgaa
gaagataaaatctaccgtgagattctgattgcctctcagggcggtgcaaatccgcttaac
agacataagctgcctgacgtgcactttagaaccacaaacgaaatgctagacgccttttca
tttatcggaaaagaaaaagcaagggaaattgtgattgataatacgaataagatcgctgat
atgattgaagatgtgacgccgatcaaggatgaactctacacacctaaaattgaaggtgca
gatgaggaaatgcgtgagatgagttatggaatggcaaaaagcatttacggggaagaactt
cccgagattgttgaagcacgtcttgaaaaagaactgaaaagtattattggtcatgggttc
gcggttatctatctgatctcgcataagcttgttaaaaagtcactgattgatggctacctg
gttggatcacgtggatctgtaggatcatcttttgttgctacaatgactgagatcacagag
gttaatccgctgccgccacactatgtatgcccgaaatgtaaggaatctgagttctttaat
gacggttcagtcggttccgggtttgaccttgatgataaagactgtccgaaatgtgaagtg
ccatatattaaagatggacaggatattccgtttgaaacgttcctaggattcaagggggat
aaggtgcctgatattgacttgaacttcagtggtgaatatcagcctgttgcgcacaattat
acaaaagtattattcggtgaagattatgtctatcgtgccggaacaatcggtactgtagct
gataaaaccgcctttggctatgtaaaaggatatgcaggtgaccataatctgcactttaga
ggagcagaagttgagagactcgcaggcggatgcacaggcgtaaagcgtacaacaggacag
cacccaggtggtattattgttgtgcctgattacatggatatttatgattttacaccaatt
cagttccctgctaacgcaagtgaatctgaatggaaaacaacgcattttgatttccattcc
atacatgataatctgctgaagctcgatatactcggtcacgatgatcctactgtgatcaga
atgcttcaggatctgtcaggtattgatcctaaaaccattcctactgatgaccctgaagtc
atgaaaatattcagtggaacagaatcactcggagtaaccgaggagcagattatgtgtaaa
accggtacacttgggattccggagtttggaacaagatttgtaagacaaatgcttgaagat
acaaagccgacaaccttttctgaattagttcagatttccggtttgtctcatggaacggat
gtatggctcggtaacgcacaggagctgattcataacggtatctgtgaactgtcagatgta
atcggatgccgtgacgatattatggtttatctgatctatcagggacttgagccttctctg
gcatttaaaatcatggaatttgtacgtaaaggaaaaggtctttctcctgagtgggaagaa
gaaatgaaaaataatggtgtgccggactggtatatagattcttgtaaaaagattaaatat
atgttccctaaagcgcacgcagcagcctatgtactaatggctgtccggattgcttacttt
aaggttcaccacccaatactttattacgctgcttattttacagtacgtgcagaagatttt
gaccttgaagcaatggctgcaggttctcaggctataaaagctaaaatcgaagcgattaat
gctaaagggcttgatgctgcaccgaaggaaaagagtttactgactgtacttgaattatgt
cttgaaatggtggaaagaggttatacttttaaacaagtggacctttataagtcagatgca
aaagagtttaaaatagaaggcaactcgttaataccgccatttaatgcaattccgggtctt
ggtacgaatgccgctatcaatattgttgaagccagaaaaaatggtgagtttctttcaaaa
gaagacttacaaaagcgtggtaaggtttcaaagaccattattgaatatctggactcacag
gggtgccttgcaggactgcctgatcagaaccaattatcgctcttctag
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