Janthinobacterium lividum: G3257_18545
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Entry
G3257_18545 CDS
T06723
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
jlv
Janthinobacterium lividum
Brite
KEGG Orthology (KO) [BR:
jlv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
jlv03009
]
G3257_18545 (rimO)
Enzymes [BR:
jlv01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
G3257_18545 (rimO)
Ribosome biogenesis [BR:
jlv03009
]
Prokaryotic type
ribosomal protein modification factors
G3257_18545 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAM_2
Radical_SAM
UPF0004
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QKY06095
LinkDB
All DBs
Position
complement(4173833..4175197)
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AA seq
454 aa
AA seq
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MLAMPGAAPKVGFVSLGCPKALVDSEQILTQLRAEGYETAKSYAGADLVIVNTCGFIDAA
VQESLDAIGEALAENGKVIVTGCLGAKKDAAGDDIIMKVHPKVLSVTGPHALAEVMDSVH
FHLPKPHAPFLDLVPPQGVKLTPKHYAYLKISEGCNHRCSFCIIPSMRGDLVSRPIGELM
IEAENLFKAGVKELLVISQDTSAYGVDVKFRSGFWNGRPVKTHMTQLTEALGELAKSYGA
WVRLHYVYPYPHVDQIIPMMSGGHILPYLDIPMQHAHPDVLKRMKRPASGEKNLDRIQAW
RAINPDLTIRSTFIAGFPGETEAEFEYLLDFLKEAQIDRLGCFAYSPVEGATANAIANPV
PEELREERRGRVMLLQEEISKKRLQAKVGKTVRVLIDEVTRSGGVGRSSADAPEIDGVVY
VKPPFEPHRKLAVGQFVDVTITSADAHDLWGAAE
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgctggccatgccaggtgcggcgccgaaagtgggctttgtctcgctcggctgcccgaaa
gcgctggtcgactccgaacaaatcctgacccaactgcgcgccgaaggctacgaaacggcg
aaatcctacgctggcgccgatctggtgatcgtcaacacctgcggttttatcgatgctgcc
gtgcaagagtcgctcgacgccatcggcgaagcgctggctgaaaacggcaaagtgatcgtg
accggttgcctgggcgccaagaaagatgctgccggcgacgacatcatcatgaaggtgcac
ccgaaagtgctgtccgtcacgggcccgcacgcgctggccgaagtgatggattccgtccac
ttccatctgccgaaaccgcatgcgccgttcctcgacctggtgccgccgcaaggcgtcaag
ctgacgccgaagcactatgcctacctgaaaatttccgaaggctgcaaccaccgttgcagc
ttctgcatcatcccatcgatgcgcggcgacctggtctcgcgtccgatcggcgaactgatg
atcgaagcggaaaacctgttcaaggccggcgtcaaggaattgctggtcatttcgcaagac
acctcggcgtatggcgtggacgtgaaattccgttccggcttctggaacggccgtcccgtg
aaaacccacatgacgcagctgacggaagcgctgggcgaactggccaagtcctacggcgcc
tgggtgcgcctgcactatgtgtatccatacccgcacgtggaccagatcatcccgatgatg
agcggcggccacatcctgccttacctcgacattccgatgcagcatgcgcatcctgacgtg
ctcaagcgcatgaagcgcccggccagcggcgagaaaaacctcgaccgcatccaggcctgg
cgcgccatcaatccggacctgacgatacgctcgaccttcatcgccggtttcccaggcgaa
acggaagcggaattcgagtatttgctggacttcctcaaggaagcgcagatcgaccgcctc
ggctgcttcgcgtattcgcctgtcgaaggcgcgaccgccaacgccatcgccaaccccgtg
ccggaagagctgcgcgaagagcgccgcggccgcgtgatgctgctgcaggaagaaatctcg
aaaaaacgcttgcaagccaaggtcggcaagaccgtgcgcgtgctgatcgatgaagtcacc
cgctccggcggcgtgggccgctcgtccgccgacgcgccggaaatcgatggcgtcgtgtat
gtgaagccgccattcgagccgcaccgcaagctggcggtcggccagttcgtcgatgtgacg
attacatccgccgatgcgcacgacctgtggggcgcggccgagtaa
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