Juglans regia (English walnut): 108989248
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Entry
108989248 CDS
T05245
Name
(RefSeq) DNA-directed RNA polymerase III subunit 2 isoform X1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
jre
Juglans regia (English walnut)
Pathway
jre03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108989248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
jre03021
]
108989248
Enzymes [BR:
jre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108989248
Transcription machinery [BR:
jre03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
108989248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
FtrD-like
Motif
Other DBs
NCBI-GeneID:
108989248
NCBI-ProteinID:
XP_018818342
UniProt:
A0A2I4EG15
LinkDB
All DBs
Position
5:complement(1248683..1293646)
Genome browser
AA seq
1162 aa
AA seq
DB search
MGLKQDSLEEHTKQNKDVGKQLPDYYGIEKQFLAAPIKSAVDKYKLVPEFLKVRGLVKQH
LDSFNYFVNHGIQKIVRANDRIASSVDPSIYIWFKDVRIGEPSMPRDGVSEEINPQMCRL
SDMTYSAPILISVEYIQGSHTQKIRLEKNEVVIGRMPIMLRSCRCVLYGKDEADLARLGE
CPLDPGGYFIIKGTEKVMLIQEQLSKNRIIIDTDKKGNINASVTSSTEERKSKTVILMEK
GKMYLHLNQFVNKIPILVVMKAMGMESDQEVVQMVGRDPRYSDLLLPSIEECAKKYGVYT
KQQALEHLETKVKKSTYSGSSSVKEGRALSILRHIFLANVPVRQDNFRAKCIYVAVMLRR
MIDAVLNKDTMDDKDYVGNKRLELSGQLISLLFEDLFKSMIEEVKKRMDMNMARLSRSSR
FDPLQYVRGDSISAGLERTLSTGNFNVKRFRMDRKGMTQVLARLSFIGTLGHMTRISPQF
EKSRKVSGPRALQPSQWGMLCPCDTPEGEACGLVKNLALMTHVTTDEEEGPLISLCYCLG
VEDLELLSGEELHAPNSFLVIFNGLILGKHRRPQHFATVMRKLRRAGKIGEFVSVFVNEK
QRCVYIASDGGRVCRPLVIADKGISRIKEHHMKELLDGVRTFDDFLRDGLIEYLDVNEEN
NALIALYEGEATPESTHIEIEPFTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAY
NQLSRMDTLLYLLVYPQRPLLTTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNK
SSLDRGFGRCIVMKRCSAIRQKYENNTEDRIIRPNREGDGAGRMQILDDDGIAAPGEVIR
PGDIYINKESPIITRGPMVSPAGLPDRAYRPSIQTFKGSEGESCVVDRVALFNEKNNNLC
IKFLIRHTRRPEVGDKFSSRHGQKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTV
GKMIELLGGKAGVSWGRFRYGSAFGEPSGHADTVEALSEALVNKGFSYNGKDFLYSGITG
CPLQAYIFMGPIYYQKLKHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCL
IAYGASMLIFERLMISSDPFEVQVCRVCGLLGYYNHKLKTAICSSCKNGDNISTMKLPYA
CKLLIQELQSMNIVPRLKLAEP
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgggccttaagcaggattccttggaagagcatacgaagcaaaacaaagacgttgggaag
cagctgcccgattattacggcatcgaaaagcaattcctcgccgcccctatcaagtccgcc
gttgacaaatacaagcttgttcccgagttcctaaaggtgagaggactggtgaaacaacat
ttggattcttttaattactttgtgaatcacgggatccagaagattgtccgtgctaatgat
cgtatagcatccagtgtcgacccgagtatctatatctggttcaaagatgttagaattggt
gagccctcaatgccaagggatggtgtgagcgaagaaattaatccccaaatgtgccggtta
tctgatatgacgtattctgctccaattttgatcagtgtagagtacattcaaggaagtcat
acccaaaagataagattggaaaagaatgaggttgttattggaagaatgcctatcatgtta
cggagttgccgctgtgtcttatatggaaaagatgaagctgatcttgcaagacttggtgag
tgtccccttgatcctggaggatattttattatcaaagggacagagaaggtgatgttgata
caggaacaactatcaaagaataggattattattgatactgacaagaagggaaacataaat
gcatctgtgacaagcagtaccgaggaacgaaaaagcaaaactgttattttgatggaaaaa
gggaagatgtatttgcatttaaatcagtttgtaaacaagattcctattttggtggtcatg
aaggccatgggaatggagagtgatcaagaagtcgtacagatggttggaagagatcctcga
tacagtgacctacttttgccatctatagaggaatgtgcaaaaaagtatggtgtatacacg
aaacagcaagccttagagcatcttgagacaaaggtgaagaagtccacttattctggttct
tcatcagtgaaggaaggtagagctttatccatcctgcgacatatatttcttgccaacgtt
ccggtgcggcaggataattttcgtgcaaaatgtatatatgttgctgtaatgttaagacgc
atgatagatgcagtgctgaataaggacacaatggatgacaaggattatgtgggaaacaaa
cggttggaattatctggccagttaatttctcttctctttgaggatttgttcaagtcgatg
attgaagaagttaagaagaggatggacatgaatatggcaagactgagcaggtctagccga
tttgacccattgcaatatgttcgcggagacagtatttctgctggcctagaaaggactctt
tctactggtaacttcaatgtcaaacggttcaggatggacaggaaaggcatgacacaggtg
ttagctaggctatcctttattgggactttgggacacatgacaagaatctcaccacaattt
gagaagtccagaaaagtaagtggacctcgagctttgcagcctagtcagtggggcatgctt
tgcccatgtgatactcccgaaggtgaagcttgtggactggtaaaaaacttggccttgatg
actcatgttacaactgatgaagaggagggcccattaatttctctgtgctactgtttggga
gttgaagacttggaactactatctggagaagagcttcatgcaccgaattcctttttagtt
atatttaatgggctgatccttggcaagcatcggaggccacagcattttgctacagttatg
agaaagttacggagagctggcaaaattggcgagttcgtaagtgtctttgtcaatgagaag
cagcgctgtgtttacattgcttctgatggaggaagagtttgtcgtccacttgtcattgct
gacaagggcatatcaaggatcaaagaacatcatatgaaagagttgttggatggagttcgc
acctttgatgattttttacgagatggtttgatagagtatcttgatgttaatgaggaaaac
aatgctttgattgctttatatgagggagaggcaacaccagaaagcacacatattgaaata
gagcctttcaccatcttaggtgtttgtgctgggcttattccatttcctcatcataaccag
tcacccagaaatacttatcagtgtgcaatggggaagcaagccatggggaatattgcatat
aaccagctgtctcggatggacaccttactttacctactggtgtatcctcaacgacctctg
ttgacaacaaagacaattgagctggttggatatgataagcttggagcggggcagaatgcc
actgttgctgtgatgagctatagtggctatgatatagaggatgcaattgtcatgaacaag
tcatctttagatcgtggatttggtcgctgtatcgttatgaaaaggtgctctgccattaga
caaaagtatgaaaataacacagaggacaggataattagacccaatagagagggagacggt
gcaggaaggatgcagatcctagatgacgatgggattgctgcacctggggaagtcattcgg
ccaggggacatttatatcaataaggagtcccccatcattacaagggggccaatggtttct
ccagctggactaccagatagagcatataggcccagtatacaaacattcaagggttctgaa
ggagagtcttgtgtggtggatcgagttgctctttttaacgagaagaataataatttatgt
atcaagttcttaatccgtcatactcgtaggccagaggttggtgacaaatttagcagcaga
catgggcaaaaaggtgtttgtggcaccattatccagcaggaagacttccccttttctgaa
cgtggcatatgccctgatttgattatgaatcctcatgggtttcctagccgaatgactgta
ggtaagatgatagagcttcttgggggtaaagctggagtttcatggggtaggtttcgttat
ggcagtgcgtttggggaaccaagtggtcatgcagatacggttgaagctctaagtgaagcc
cttgtgaataaaggttttagctacaatggcaaggacttcctttattcaggtatcacaggt
tgcccactgcaagcatatattttcatggggccaatttattaccaaaagttaaaacatatg
gtcctagataaaatgcatgctcgaggtagtgggccccgtgtcatgctaacaagacaaccc
acagaagggagagctcgaaatggaggactacgggtcggagaaatggaacgcgattgtctg
attgcttatggcgctagtatgttaatttttgagcgcctaatgatctctagtgatcctttc
gaagttcaggtttgcagagtatgcggtctgttaggatattacaaccataagctgaaaact
gcaatttgttcatcgtgtaaaaatggggataatatatctactatgaaacttccatatgca
tgcaagctcttaatccaggagctccaatcaatgaatattgttccgcgcttaaagctagca
gagccatga
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integrated database retrieval system
