Juglans regia (English walnut): 108992655
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Entry
108992655 CDS
T05245
Name
(RefSeq) DNA mismatch repair protein MSH7
KO
K08737
DNA mismatch repair protein MSH6
Organism
jre
Juglans regia (English walnut)
Pathway
jre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108992655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
jre03400
]
108992655
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108992655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
AAA_29
RT_RNaseH_2
Motif
Other DBs
NCBI-GeneID:
108992655
NCBI-ProteinID:
XP_018822803
UniProt:
A0A2I4ETS3
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All DBs
Position
1:39403767..39413561
Genome browser
AA seq
1109 aa
AA seq
DB search
MQRQKSILSFFQKPSSETNGSGAGNVIGSRRVPQFPSKQEKQKGSALNRATNDAAMDSSF
EIRGTDTPPEKVPRQVLPVKFATNENDRDSSLFSSIMHKFVKVDDGEKASERKLGDGGFS
NVSTISGRYVEPEGLHKQDVASQRPKKGDVVNSSGIVDQQCALHIEIDDDILGPETPGMR
PLASCLKRFQEDIPSCGVKNDTSLMDSSKRLKLLHDSTVLNKNHTEVSDTTSKFEWLDPA
RIKDANGRRPGDPLYDKKTLYIPPDALKKMSASQKQYWSVKCQYMDVVLFFKVGKFYELY
ELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDDAVQKLVARGYKVGRIEQLETSDQAK
ARGSNSVISRKLVQVVTPSTATDGNIGPDAVHLLAIKEEHSGLDNGSIVYGFAFVDCAAL
KIWVGSIKDDASCAALGALLMQVSPKEVIYESRGLSKEAHKALRKYSLTGPVTLELSPVQ
LITDFMEASEVRNLVQLKGYFKGSSTLWNHVLDNVMHHDIALSALGGLISHLSRLMLDDV
IRNGDILPYQVYRGCLKMDGQTLVNLEIFSNNADGGPSGTLYKYLDNCMTSSGKRLLRNW
ICHPLKAIEDIDNRLNVVEDLVARSEIMSLVAQYLHKLPDLERLLGRIKASVQSSASLLL
PSFGKKVLKQRVKLFGSLVKGLRVGFDLLTLLQNEGHIIKSLAKVCRIPMLSGSDGLDQF
LAQFEAAVDSEFPNYQNHNIIDSDAETLSILIELFIEKATQWVEVIYAINCIDVLRSFGV
TATLSCGAMSRPVFLPQSENMTVGEETGPTLKVKGLWHPFALGENGGLPVPNDIILGKDI
DGYHARTLLLTGPNMGGKSTLLRATCLAVILAQLGCYVPCELCVLSLVDIIFTRLGATDR
IMTGESTFFVECMETASVLQNATQDSLVILDELGRGTSTFDGYAIAYAVFRNLIEKVNCR
LLFATHYHPLTKEFASHPHVTLQHMACTFKSKSDCNSKGDQELVFLYRLTSGACPESYGL
QVATMAGIPEQVVEAASKAGQVMRKSLGESFRSCERRSEFSTLHEEWLKMLMGVSQTGDC
NFDDSDAFDTLFCLWHELKSSYGSHGIYK
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgccaaaaatcgatactctcattttttcagaaaccctcgtcggagaccaatggc
tccggtgctggaaatgtgatcggaagccggcgagttcctcagtttccttctaagcaggag
aagcagaaaggttccgctctcaatcgggccacgaatgatgctgccatggactcgtctttt
gaaatcagaggaaccgacacaccgccggagaaggtgccgcggcaggttttgcctgtgaag
ttcgccacaaacgagaacgacagagattcttccctgttctcgagtataatgcataagttt
gtgaaggttgacgatggagaaaaggctagcgagaggaagttgggtgatggtggtttctct
aatgtttctacaatatctggtagatatgttgagccggaaggattgcataaacaagatgtg
gcttcccaacgtcccaaaaagggtgatgtagtcaattctagtgggatagttgatcaacaa
tgcgccttgcatatcgaaattgatgacgatattcttgggcctgaaacgcctggtatgaga
cctcttgcttcttgtttgaagcgatttcaagaggatattccaagttgtggggttaagaat
gacacttccttgatggattcgagcaaaaggctgaaactactccatgattcaacagtttta
aataagaatcatacagaagtatctgatacaacgagcaagtttgagtggcttgaccctgct
cgaatcaaagatgccaatgggcgaaggcctggtgatcctctttatgacaagaagacactt
tatataccaccagatgctctgaagaaaatgtcagcatctcagaaacaatattggagtgtc
aaatgtcaatatatggatgttgtgcttttctttaaagtgggaaagttttacgagctttat
gaactagatgctgaaattggccataaggagcttgactggaaaatgacatttagtggtgtg
gggaaatgtcggcaggtcggtatatctgaaagtgggatagatgatgctgttcaaaagctt
gttgctcgtggatataaagttggacgaatagagcagttggagacatctgatcaagcaaaa
gccagaggttcaaattctgtaatttcaagaaaattggttcaggtagtcaccccatcaacc
gcaactgatggtaatattgggcctgatgctgttcatcttcttgcaataaaagaggagcat
tctggcttggataacggttcgattgtatatggctttgcttttgtggattgtgctgcttta
aaaatttgggttggttcaatcaaggatgatgcgtcctgtgctgctcttggggctttgctg
atgcaggtgtcgccgaaagaagttatatatgagagtagagggctgtccaaggaagctcat
aaagccctcagaaagtactcattaacaggtcctgttacactggaattgagtccggtgcag
ctgattacagatttcatggaagcttctgaagttagaaatttggtgcaattgaagggatac
tttaaagggtcttctactttatggaatcatgtccttgataatgtgatgcaccatgatatt
gccttatctgctcttggtggactaataagtcatctatccaggttgatgttagatgatgtc
atacggaatggagacatactgccatatcaagtttataggggttgcctcaaaatggatgga
cagacactggtcaatcttgagattttcagtaataatgctgatggtggtccatcaggtact
ttgtacaaatatcttgataattgtatgacatcatctggtaagcggcttttaaggaattgg
atctgccatccgctaaaagctattgaagacattgataataggcttaatgtggttgaagat
ttagttgcacgttcagaaattatgtcacttgttgctcaatatcttcacaagcttcctgat
ttagaaaggttgcttggacggattaaagctagtgttcagtcatcagcttctctgttactg
ccctcatttggaaaaaaagtattgaaacagcgagttaaactgtttgggtcacttgtgaaa
ggcctgcgtgttggatttgatctcttaacactattacagaatgaggggcatataatcaag
tctttagcaaaagtatgtagaattccaatgctaagtggtagtgatgggctggaccaattc
cttgcccaatttgaagcagctgtagatagcgagttcccgaattaccagaatcacaatata
atagattcagatgctgaaacactctccattcttattgagttatttattgaaaaagctact
caatgggttgaagtcatttatgccatcaactgtatcgatgtactaagatcttttggagtc
actgctactttatcatgcggggcgatgtctagacctgtttttttgcctcaatctgaaaat
atgactgtgggggaagaaacgggacccacgcttaaagttaaagggctatggcatccattt
gcccttggagagaatggaggattgcctgtcccaaatgacattatccttggtaaggatata
gatggttatcatgctcgaactttgctattgaccggacctaatatgggtgggaaatcaact
ctcttgcgtgcaacatgtctagctgtcatactggcacagctgggctgctatgtgccctgt
gagttgtgtgttctctcactcgtggatattatcttcacacggcttggtgctactgatcga
atcatgaccggggagagtaccttcttcgttgagtgcatggaaacagcatcagttcttcaa
aatgccactcaagattctttggttattcttgatgaactgggtcgaggaacaagcactttt
gatggatacgccattgcatatgcggtatttcgcaatttgatcgaaaaggttaactgtcga
ctgctatttgctacacattaccacccacttacaaaggaatttgcttctcatcctcatgtc
accctgcaacacatggcctgcactttcaagtcaaaatcggactgcaattctaaaggtgac
caggagttggtttttctgtaccggctaacctctggagcatgcccagagagctatggattg
caagtggcaacgatggctggaattccggaacaggtggttgaagctgcatcaaaggctggc
caagtgatgagaaaatcacttggcgaaagtttcaggtcatgtgagcggagatcagagttc
tcgaccctacatgaagagtggttgaagatgctgatgggtgtttctcaaaccggagattgt
aattttgacgacagtgatgcttttgatacgctgttttgcttgtggcatgagctaaagagc
tcatatggatcgcatggcatttataagtag
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