Juglans regia (English walnut): 109000976
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Entry
109000976 CDS
T05245
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
jre
Juglans regia (English walnut)
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jre03016
]
109000976
Enzymes [BR:
jre01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
109000976
Transfer RNA biogenesis [BR:
jre03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
109000976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-GeneID:
109000976
NCBI-ProteinID:
XP_018833611
UniProt:
A0A2I4FPN1
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Position
8:414313..422213
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AA seq
620 aa
AA seq
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MDDIEDLVVGAGAPPGFRLPLSSVGVNLKKKRSDKFYQTQDSPSPKIPGTQTIYIKTFGC
SHNQSDSEYMAGQLSAFGYSLSDNPQEADLWLINTCTVKSPSQSAMDTLIAKCKIAKKPL
VVAGCVPQGSRDLKELEGVSIVGVQQIDRVVEVVEETLKGHEVRLLNRKTLPALDLPKVR
RNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVIADGVKEIWLSSEDT
GAYGRDIGVNLPTLLNSIVSELPPDASTMLRIGMTNPPFILEHLKEIAEVLCHPCVYSFL
HVPVQSGSDAVLSAMNREYTESEFRTVVDTLIELVPGMQIATDIICGFPGETNEDFAQTV
SLIKKYNFPQVHISQFYPRPGTPAARMKKVPSAVVKKRSRELTSVFEAFTPYNGMEGRIE
RIWITEVAADGIHLVGHTKGYVQVLVVAPESMLGVSAIVKITSVGRWSVFGEVMETINHK
NHKSASRKDSGEDIFSPCSNACESYECTREPEPCACCGPESCLGQTNLEEESAASRNSMF
PEDLNNRYLIGWLLRKRKNHANKRVEGEIASGSKRKQEWTQGSIGEWSVVDKALLGGMLT
SFFAIMALLILLGMRSLSSN
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggacgacatagaggatttggtagtgggagctggtgctcctcctgggtttcgcttgcct
ttaagcagcgttggagtgaatctcaagaagaagaggagcgataagttctatcaaacccaa
gactctccctctcccaaaatccctggcactcagacgatatatattaagacctttgggtgc
tcacacaaccagagcgacagtgaatacatggctggtcagctttcagcttttggctactcg
ttaagtgacaatcctcaggaagcagacctgtggctaataaacacatgcacagtgaaatcc
ccaagtcagtctgccatggacactctaatagcaaaatgcaaaattgcaaaaaagccccta
gtggtggcagggtgtgtgcctcaaggaagtcgagacttgaaagagctcgaaggggtcagt
atagtcggagtccagcaaattgaccgagtggttgaagttgtggaagagaccttgaaaggt
catgaggtgcggctattgaatcgcaagacattgccagcacttgacctcccgaaggtgaga
aggaacaagtttgttgagattcttccaattaatgttggttgtttaggtgcttgtacttat
tgcaagacaaagcatgctcgtggtcatttagggagctacacgattgatagtcttgtcggg
cgtgtaaaatctgttatagctgatggagtgaaggagatatggttgagcagtgaagatact
ggagcctatggtcgtgacattggggtcaatcttccaactttgttaaattctattgtttct
gagcttcctcctgatgcaagcacgatgcttcggattgggatgacaaatcctccttttatt
ctcgagcacttgaaagagatagcagaggttttgtgtcacccatgtgtatactcatttcta
catgtaccagttcaatctgggagtgatgctgtcttaagtgcaatgaatcgggaatatacc
gagagcgagtttaggactgtggttgataccttgattgagcttgtgcctgggatgcagata
gcaaccgatatcatatgtggatttcctggtgaaacgaatgaagattttgctcaaactgtc
agtcttattaagaagtacaacttccctcaagttcatatatctcagttttatcctcgaccg
gggacgcctgcagcaaggatgaaaaaggttccaagtgctgtagtgaagaaacgaagtcgt
gagttgacttctgtttttgaagccttcacaccatataatggaatggagggcagaatagaa
agaatatggataactgaagttgcagcagatggaattcacttggttggccataccaaggga
tacgtgcaggtgctagtggttgctccagaaagtatgctgggagtttcagctattgtgaag
ataacatctgtgggaaggtggtcagtttttggagaggtgatggagactatcaaccacaaa
aatcataaatcagcgtcgagaaaggatagtggtgaggatatattttctccttgctctaac
gcttgtgaaagttatgagtgtacaagagaaccggaaccctgtgcttgttgcggacccgaa
agctgtttaggacagactaatttagaggaagaaagtgctgcttcaaggaattccatgttt
ccagaagatctaaacaaccgatacttgatcggatggttattaagaaagcggaagaaccac
gccaacaaaagagtggagggagaaattgcgtcgggatccaagagaaagcaagagtggacc
caaggaagcattggtgagtggagtgtagtcgataaggccctgctgggtggaatgcttacg
agtttctttgctatcatggctttactgatacttctaggtatgcggtctctgtcatccaat
taa
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