KEGG   Juglans regia (English walnut): 109005225
Entry
109005225         CDS       T05245                                 
Name
(RefSeq) DNA-directed RNA polymerase D subunit 2b-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
jre  Juglans regia (English walnut)
Pathway
jre03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109005225
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    109005225
Enzymes [BR:jre01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     109005225
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     109005225
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 109005225
NCBI-ProteinID: XP_018839587
UniProt: A0A2I4G6Q3
LinkDB
Position
11:36463449..36474555
AA seq 1191 aa
MPMEESSDAKEDIAISKGDNLSNGFVTDEDDEEFIESYSIHDLDQEFLKRFCKKAAMSFF
NEYGLISHQINSYNDFIENGLQKVFDSFGEIIVEPGFDPSKKGESEWRYASVRFGKVSLD
QPSFWGGEKDNDMFPRHARLQNMTYSSKMKVKIHVQVYTQKLVRSDKFKTGKDQYIDRDV
ITEDNRDITIGRIPVMVKSDICRMKGAEKRDCEFDNGGYFLIKGAEKTFVAQEQLSMKRL
WILNNQGWTVAYKSETKKNRLIMKLVGISKIEDIKGGEKVLTVYFLSTEIPLWILFFALG
VSSDREAMDLIDYDIEDASISNILFASIREADEKCGGFRRAKKALSYVDKLVKNTKFPPG
ESIEECFSKYLFPGLKVPKLKARFLGYMVKCLLQAYTGCRKCDNRDDFRNKRFDLAGELL
ERELRVHLAHARKRMAKVLQRDLYGERSVRPIEHYLDASIITNGLTRAFSTGAWSHPFKR
MERISGVVATLGRTNPLQTLAEMRRTRQQVQYTGKVGDARYPHPSHWGRVCFLSTPDGEN
CGLVKNLAITGLVSTNILEPMTHIFFDCGMEELADDASMCRKYKVFLNGDWVGVCEDSIS
FVAELRNKRRQKLLPHQVEIKRDEQHEEVRIFSDAGRILRPLLVVENLNKVKGYKGENYT
FQYLLDKGIIELIGTEEEEDCRTAWGIKYLFMEKEGKSPAQYTHCELDMSFLLGLSCGIV
PYANHDHARRVLYQSQKHSSQAIGFSTTNPNIRVDTLSHSLLYPQRPLFRTIASDCLGKP
GSPLGHHGILPKPELYNGQNAIVAVNVHLGYNQEDSLVMNKASLERGMFRSEHIRSYKAE
VDNKETLEKRRKPDDCVNFGKIQSKIGRVDSLDDDGFPFIGANLQSGDIVIGRCAESGND
HSIKLKHTERGMVQKVVLSSNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQ
ENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGSLRYATPFSTLSVDAIT
EQLHRAGFSRWGNERVYNGRTGERVRSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTR
QPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHICQKCKNVANVIQRS
VTGGRKIRGPYCRVCESLDDIVKVNVPYGAKLLCQELFSMGINLKFETQLC
NT seq 3576 nt   +upstreamnt  +downstreamnt
atgccaatggaggagtcatctgatgccaaggaagatattgctattagtaagggtgataat
ctttcaaatgggtttgttacggatgaagatgatgaggaatttattgaatcatatagcata
catgatctggaccaagagtttttgaaaagattttgtaagaaggcagccatgtcattcttt
aacgagtatggtctcattagtcaccaaattaactcatacaatgacttcattgagaatggt
ctccagaaggtatttgattcttttggtgagattattgttgagcctggatttgacccttca
aagaagggagagagtgagtggcgatatgcttcagttagatttgggaaggtcagccttgac
caaccaagcttctggggtggtgagaaggacaacgatatgtttcctaggcatgcccggctt
cagaacatgacgtactcatcaaagatgaaagtgaaaattcatgttcaggtatatactcaa
aaacttgtcagaagtgacaagtttaaaactggaaaagatcaatatatcgaccgagatgtc
ataactgaagataacagggatatcacaatagggaggatccctgtgatggtgaagtccgat
atctgccgaatgaaaggagcagagaaaagagactgtgagtttgataatggaggttatttt
ttgatcaagggtgcagagaagacatttgttgctcaggagcagctaagtatgaagaggctt
tggattttgaataatcaaggttggacagttgcatacaagtcagaaacaaagaagaatagg
ttaatcatgaaactggtggggatttctaaaattgaagatatcaaaggaggagagaaagtt
cttactgtatatttcttgtcgacagaaatccctttatggatattgttttttgctcttggt
gtatcatcagacagagaagctatggacctgattgattatgacattgaagatgccagcata
tcgaatatactgtttgcctcaattcgcgaagctgatgagaaatgtggtggctttcgtaga
gcaaagaaagctctaagttatgtagataaacttgtaaagaataccaaatttcctcctggg
gaatctattgaagagtgctttagcaagtatctgtttccgggactcaaggtcccaaaactg
aaggctcgttttcttgggtatatggtgaagtgcctcctgcaggcttacactggctgcaga
aaatgtgataacagggatgattttagaaacaagaggtttgacttggcaggtgagctactt
gagcgggagctgagagtgcatcttgcacatgcacggaagcgcatggcaaaggttttgcag
agagacctttatggagagcgtagtgtgcgtccaattgaacactatctggatgcttccata
atcaccaatggtcttacacgagcattctcaactggagcatggtcacatcctttcaagagg
atggaaaggatttcaggtgtagtggcaacactagggcgaacaaatccattacagacattg
gctgaaatgaggagaacacgccagcaggttcagtacacagggaaagttggcgatgccaga
tacccacatccttctcactgggggagggtatgctttctgtctactccagacggtgaaaat
tgtgggcttgtgaaaaatttggccatcactggcctagtaagcacaaacatattggagcct
atgactcatatattttttgattgtgggatggaggagttggcagatgatgcttcaatgtgt
agaaaatataaagtgtttttgaatggggactgggttggagtttgtgaagattccatttca
tttgttgctgagctcaggaataaacgacgccaaaagctgttgccacatcaggttgaaatc
aaaagagatgagcagcatgaagaagtgcgcatattttctgatgctggtaggattctacgg
cctcttttagttgttgaaaatttgaacaaggttaaaggatataaaggtgaaaattacacc
ttccaatatcttttggataagggcataattgagctaattggaactgaggaagaagaagac
tgtcgtactgcatggggcatcaagtatctgttcatggaaaaagagggaaagtcacctgct
cagtacacccactgtgaactagatatgtcatttttattaggtttgagctgtggaattgtc
ccatatgcaaatcatgaccatgccagaagggtcctttaccagtctcagaagcactcttca
caggctatagggttctccacaacaaatcctaacattagagtagatactctgtctcacagt
ctattgtatcctcagaggccacttttcaggactatcgcctctgattgtcttggaaaacca
ggatctcctctgggtcatcatggaatactgccaaagcctgaattatacaatggccagaat
gctattgtggcagtcaatgttcacctagggtacaaccaagaagactccttggtgatgaac
aaggcttcgttggagcgtggtatgtttcggtctgagcacattagaagctataaggccgag
gttgacaataaggaaactttggaaaagaggcggaaacctgatgattgtgtcaactttggc
aagattcaaagtaagattggacgcgttgacagtcttgatgatgatggtttccctttcatt
ggtgcaaacctgcagagtggtgacattgtcatagggaggtgtgcagagtctgggaatgac
cacagtattaaattgaagcacactgaaaggggcatggttcagaaagttgtgctgtcttct
aatgatgatggaaagaattttgctgtggtgtccctgagacaggttcgatccccatgtctt
ggagacaaattctcaagcatgcatgggcaaaaaggtgttctaggctttttggagtcgcaa
gagaacttccctttcacaatacaagggatagtaccggatattgtaataaatccacatgca
tttccttcacgacaaactcctggtcaactcctagaggctgctttagggaagggaatagct
tgtggtggttccttgagatatgccaccccattctccacactctctgttgatgccatcacg
gaacagcttcatagggctggattttcaagatggggaaatgagagagtatacaatggacga
actggcgaaagggttcgctccctcatatttatgggcccaactttctatcagcgtctgatt
cacatgtctgaagacaaggtcaaatttcgcaacactggtccagtccatcctcttacccga
caaccagtggcagatcggaagcgatttggtgggatcaaatttggtgagatggagcgtgac
tgccttatagcacatggtgcctcagcgaacttgcatgaacgcctttttacactcagtgac
tcctcccaaatgcacatatgccaaaaatgcaaaaatgttgccaatgtgatccaacggtct
gtgactggtggccgtaagattaggggtccgtattgccgggtctgtgaatcattagatgac
attgtaaaggttaatgtcccttatggggctaagctattgtgccaggaacttttcagtatg
ggcataaatctgaagtttgaaacccagctctgttga

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