KEGG   Juglans regia (English walnut): 109012116
Entry
109012116         CDS       T05245                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A-like
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
jre  Juglans regia (English walnut)
Pathway
jre03020  RNA polymerase
jre03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:jre00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    109012116
  09124 Replication and repair
   03420 Nucleotide excision repair
    109012116
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:jre03021]
    109012116
   03400 DNA repair and recombination proteins [BR:jre03400]
    109012116
Transcription machinery [BR:jre03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     109012116
  RNA polymerase III system
   RNA polymerase III
     109012116
  RNA polymerase I system
   RNA polymerase I
     109012116
DNA repair and recombination proteins [BR:jre03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      109012116
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 109012116
NCBI-ProteinID: XP_018849161
UniProt: A0A2I4GZ25
LinkDB
Position
10:5914675..5919788
AA seq 142 aa
MADEDYNDLDMGYEDEPPEPEIEEGAEEDIENTNNDDVPVEPEADEKGEEHPVERPRKTS
KYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPFTIRRYLPDGS
YEDWGVDELIVEDSWKRQVGGD
NT seq 429 nt   +upstreamnt  +downstreamnt
atggccgacgaagattacaatgatttggacatgggttatgaggatgagccaccggagcct
gagattgaggaaggtgcagaggaggatatagagaacaccaacaatgatgacgttcctgta
gaacctgaagctgatgagaaaggagaagagcatccagttgaacgccctcggaagacctca
aaatatatgacaaaatatgagcgtgccagaatcttgggtactcgtgctctgcagatcagc
atgaatgctcctgtaatggtcgagttggagggtgaaactgatccactggagattgcaatg
aaggagcttcgtgagcggaagatacccttcactatccgccgctacctgccagatggaagt
tacgaagactggggagttgatgaattgatcgtggaagactcgtggaagaggcaagtgggg
ggcgattga

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