Juglans regia (English walnut): 109020747
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Entry
109020747 CDS
T05245
Name
(RefSeq) DNA polymerase delta small subunit-like
KO
K02328
DNA polymerase delta subunit 2
Organism
jre
Juglans regia (English walnut)
Pathway
jre03030
DNA replication
jre03410
Base excision repair
jre03420
Nucleotide excision repair
jre03430
Mismatch repair
jre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
jre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
109020747
03410 Base excision repair
109020747
03420 Nucleotide excision repair
109020747
03430 Mismatch repair
109020747
03440 Homologous recombination
109020747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
jre03032
]
109020747
03400 DNA repair and recombination proteins [BR:
jre03400
]
109020747
DNA replication proteins [BR:
jre03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
109020747
DNA repair and recombination proteins [BR:
jre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
109020747
MMR (mismatch excision repair)
DNA polymerase delta complex
109020747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
DNA_pol_D_N
Motif
Other DBs
NCBI-GeneID:
109020747
NCBI-ProteinID:
XP_018858819
UniProt:
A0A833XVI5
A0A2I4HRP3
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All DBs
Position
4:32399405..32405709
Genome browser
AA seq
442 aa
AA seq
DB search
MEPMEIDSEKTLQRKQATYTSLDDIFEIQKETYRGQQYSQIYFARLHLMRTLLYSLVPNR
KPHLPVCTILQLEEGKECIIVGTLYKHMKLKPCVLDEYSKERSATPLVRPHNFMHTDDNL
VLEDDSGRVKLAGSVLLPSAYVTGIVVALHGKETDAGDFLVQDVLEAGLPPQIELPLKSS
EDKYVVFVSGLSVGSSTSNPLQFQLLVDHITGHLGDEKEQGIAAKIVHFVVAGDSIEIPR
GLLNGQNLASKDQSRLSEPIKELDILLTQIAASLPLDIMPGPNDPANFSLPQQPLHRCLF
PGSSAYNTFRSCTNPHCFELENIRFLGTSGQNVNDLEKYSEAKDKIEFMERTLRWRHLAP
TAPNTLGCYPFTDRDPFFIETCPHVYFVGNQNEYKTDLIKGSEGQFVRLICIPQFCTTGV
AVVLNLRNLECHTLSFGTEFIS
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggaacccatggaaatcgactccgagaagactctccagagaaaacaggctacttatacc
tccctggacgatatctttgagattcagaaagagacgtacaggggccagcagtacagccag
atttactttgctcgtctccacttgatgcgaaccctcctctattcgctcgttccaaatcgg
aaaccccatttacctgtttgcacaattttgcaattggaagaaggcaaggaatgcatcatt
gttggaaccctttacaagcacatgaaactcaaaccttgcgttctcgatgagtactccaag
gagagatctgcgactccccttgtcaggcctcataattttatgcacacagatgataatttg
gttttagaagacgatagtggaagagttaagcttgctgggagtgtgctcttaccatctgca
tatgtaacaggcattgttgttgctttgcatgggaaggaaactgatgctggcgacttcttg
gttcaagatgtcctagaagctggcttaccaccccagatagagcttcctctaaaatcaagt
gaagacaagtatgttgtctttgtatcggggttaagtgttgggagcagcacttctaatcct
ctccaatttcagcttcttgttgatcatataacaggacatttaggagatgagaaggaacaa
ggcattgcggcaaaaatagttcactttgtagttgccggggattctatcgaaatcccacgt
ggtcttcttaatggacagaatttggcttcaaaggatcaatcaaggctgtctgagcctatt
aaagagctagatatattgttgacacagattgctgctagtttgcctctagatatcatgccc
ggccccaatgatcctgctaacttttcgttgcctcagcagccgttgcatagatgtcttttt
cctgggtcttcggcttataacacttttaggtcttgtactaaccctcattgctttgagctt
gaaaatatcagatttcttggaacatcaggtcagaatgtaaatgatcttgagaagtactca
gaggcgaaggataaaattgaattcatggaaagaacattaaggtggaggcatttagccccg
acagcacctaatactcttgggtgttatcctttcacggacagggatcctttcttcattgag
acctgccctcatgtttattttgtggggaatcagaatgaatacaaaactgacttaataaag
ggatcagaagggcagtttgtaagactcatatgcattcctcaattctgcactacaggagtt
gctgttgtgctaaatttgagaaatcttgaatgtcatactcttagttttgggactgaattc
atctcttga
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