Janthinobacterium rivuli: P9875_03975
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Entry
P9875_03975 CDS
T09016
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
jri
Janthinobacterium rivuli
Brite
KEGG Orthology (KO) [BR:
jri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
jri03016
]
P9875_03975 (mnmC)
Enzymes [BR:
jri01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
P9875_03975 (mnmC)
Transfer RNA biogenesis [BR:
jri03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
P9875_03975 (mnmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
NAD_binding_8
NAD_binding_9
Pyr_redox_2
FAD_binding_3
FAD_binding_2
GIDA
HI0933_like
Pyr_redox
AlaDh_PNT_C
3HCDH_N
TrkA_N
FAD_oxidored
Methyltransf_30
Thi4
Shikimate_DH
NAD_binding_7
2-Hacid_dh_C
adh_short
ApbA
Motif
Other DBs
NCBI-ProteinID:
WFR80345
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All DBs
Position
879982..881613
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AA seq
543 aa
AA seq
DB search
MRRALVLLDTDFDGARLRAACAAHGGRRLHYIALAPRPVDARHLPEQWHAQWPPCVPGLH
RMVSHDGLVTLDVLIGEPDACLAQLSARVDEVHLAWVPAATLVLARLMVDGARLQAVHLD
EAQRTALQKNGFVFDESRLRAVFYARSGESVAAVVPERRAIVIGAGVAGAAACERLAARG
WKVTLIERHAQPASEASGNLAGIFMPLLSKDDNIATRLTRAAYLYSLRRWKDLGGIGAAI
EGAQSGVLHLARDGAHAQVQRQIAASGLYPREFARWLEAPEATAMLGAPAPDGAWWFEQG
GWARPSSVCAAMLNACGALLTRRFSSSALRLERGDQEWLVRDADGALIAAAPNVILAAGT
GAIDFEQAAGLPLDAVRGQVTHLAEGSLPSLPFVVCREAYMTPAHQGVVCVGASYDADTD
TDLRPSSQEDNIAKIADILGVAPFAAPLAGRTGFRCMAPDRLPLAGALPDPGAPGRCERL
RDVPRWPGLFGLLGYASRGLIWAPLAAELLACQLEGEPLPLESQLAAALDPARFLLRERR
RAG
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgcgcgctggtcctgctcgatacggattttgacggtgcccgcttgcgcgccgcc
tgcgcggcgcatggcggccgccgtctgcactacatcgcgctggcgccgcgtcccgtcgac
gcgcgccacttgcccgagcagtggcacgcacagtggccgccttgcgtgccgggcctgcac
cgcatggtctcgcacgatggcctcgtcacgctcgacgtgctgatcggcgagcccgatgcc
tgcctggcgcaattgtcggcgcgtgtcgatgaagtgcatctggcctgggtgccggcagcc
acgctggtgctggcgcgcctgatggtcgatggcgcccgcctgcaggccgtgcacctggac
gaggcgcagcgcacggcgctgcaaaagaacggttttgtttttgacgagagccgtttgcgc
gccgtgttttatgcgcgctccggagaatccgtggctgccgtcgtacccgagcggcgcgcc
attgtcatcggcgctggcgtggccggcgcggccgcctgcgaacggctggccgcgcgcggc
tggaaggtgaccttgatcgagcgccacgcgcagccggccagcgaagcgtcgggcaacctg
gcgggcatcttcatgccgttgctgtcgaaggacgacaacatcgccacgcgcctgacgcgc
gccgcctatctgtattcgctgcgccgctggaaagacctgggcggcatcggcgcggccatc
gagggtgcgcaaagcggcgtgctgcacctggcgcgcgacggcgcgcatgcgcaggtgcag
cggcagatcgccgccagtggcctgtatccgcgtgaattcgcccgctggctggaagcgccc
gaggccaccgccatgctgggcgcgccggcgcccgatggcgcctggtggttcgagcagggc
ggctgggcgcgcccgtcctccgtctgcgcggccatgctgaacgcctgcggcgccttgctc
acgcggcgcttttccagcagcgccctgcgcctggagcgcggcgaccaggaatggctggtg
cgcgatgcggacggcgccctgatcgcggccgcgcccaacgtcatcctggcggcgggcacg
ggggccatcgattttgaacaggcggccggcctgccgctcgacgccgtgcgcggccaggtc
acgcacctggccgaaggcagcttgccgtcgttgccgttcgtcgtctgccgcgaagcctac
atgacgccggcgcaccagggcgtcgtctgcgtgggcgccagctacgatgcggatacggac
accgacttgcgcccatcgagccaggaagacaatatcgcgaagatcgccgacatcctgggt
gtcgctccgttcgccgcgccgctggccggtcgcacgggctttcgctgcatggcgccggac
cgcttgccgctggcgggcgccttgcccgaccccggcgcgccaggccgctgcgagcgcctg
cgtgacgtaccgcgctggcccggcctgtttggcttgctcggttacgcttcgcgcggcctg
atctgggcgccgctggcggccgagctgctggcgtgccagctggagggggaaccgctgcca
ctggagagtcaattggccgctgctttggatcctgcgcgcttcctgctgcgcgaacgccgc
cgcgctggttga
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