Kangiella aquimarina: SR900_09195
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Entry
SR900_09195 CDS
T09621
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
kam
Kangiella aquimarina
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kam03009
]
SR900_09195 (rimO)
Enzymes [BR:
kam01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SR900_09195 (rimO)
Ribosome biogenesis [BR:
kam03009
]
Prokaryotic type
ribosomal protein modification factors
SR900_09195 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WQG84636
LinkDB
All DBs
Position
1975101..1976453
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AA seq
450 aa
AA seq
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MATTPSNKSIITNKVGFISLGCPKALVDSERILTQLRTEGYDIVPTYEDADIVVVNTCGF
IDAAKQESLEAIGEALNENGKVIVTGCLGAQENDIREIHPGVLSVSGPAQYEQVLTAVHE
HLPPKAEHDPFIDLVPPQGIKLTPRHYAYLKISEGCNHKCSFCIIPSMRGKLDSRPVGQV
LDEAERLVKAGVKELLVVSQDTSAYGVDKKYALDFWQGQPVKTRMKEMCEALGQLENVWV
RLHYVYPYPHVDDIIPLMAEGKILPYLDIPFQHASPRILKLMKRPGDINNVLERIQKWRD
ICPEITIRSTFIVGFPGETEEEFQELLDFLEVAQLDRVGCFKYSPVEGATANELPDPIPE
EVKEERLARFMAVQEAISSKKLQQKIGKVMTVLVDELYEDCALARSSADAPEIDGKVIID
EGFEELTEGQFVEVTIEAADQHDLFASVNS
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaactccttctaacaaatcaatcatcaccaataaagtcggctttattagcttg
ggctgccctaaggcattggttgactcagagcgaatcctaacccagctcagaaccgagggt
tatgacattgtgccaacctatgaggatgcggatattgttgtagtgaacacctgtggcttt
attgatgctgccaaacaggaatcactagaagcaattggtgaagcactcaatgaaaatggc
aaagtgattgtaactgggtgtcttggtgctcaagagaatgacattcgtgaaatccaccca
ggtgtactgagtgttagtggcccagcgcaatatgaacaagttttaaccgcagtacacgaa
cacctgccaccaaaggctgagcatgacccttttattgatctagtgccaccacaaggtatt
aaattaacgccacgtcattatgcctatttgaagatttccgaaggctgcaaccataagtgc
agtttctgtattatcccttcaatgcgtggaaaactggatagtcgaccagtaggccaggtt
ctggatgaagcagaacgcctggtcaaagctggggtaaaagaattactagtcgtttctcag
gataccagtgcttacggtgttgataaaaaatatgccttagacttctggcagggtcagccg
gttaaaacccgcatgaaagaaatgtgtgaagcattaggtcaactggaaaatgtctgggtg
cgtctgcattatgtttatccatatccgcatgttgatgacattatcccattgatggcagaa
ggcaaaatactgccctatctggacattcctttccagcacgccagtccaagaattcttaaa
ctaatgaaacgacctggcgacattaataatgttttagagagaattcagaaatggcgtgat
atttgtcctgagattaccattcgaagcacatttatcgtgggtttccccggtgaaactgaa
gaggagtttcaggagttattagacttccttgaagttgcacagctggatcgcgttggctgc
tttaaatactcgccggtagaaggcgcaacagctaacgaattgcccgacccaattcctgaa
gaggtcaaagaagaacgtctggctcgctttatggctgttcaggaagctatcagttctaag
aagcttcagcaaaagattggtaaagtgatgacagttctggtcgatgagctttacgaagac
tgtgctttagcgcgctcgagtgccgatgctccagagatcgatggcaaagtcatcattgat
gaaggctttgaagagctgacagaaggacagtttgttgaggttactatcgaagcagctgat
cagcatgacttgtttgcatctgtaaattcataa
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