Streptomyces sp. NL15-2K: Q4V64_38520
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Entry
Q4V64_38520 CDS
T09250
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
kbu
Streptomyces sp. NL15-2K
Brite
KEGG Orthology (KO) [BR:
kbu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kbu03009
]
Q4V64_38520 (rimO)
Enzymes [BR:
kbu01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Q4V64_38520 (rimO)
Ribosome biogenesis [BR:
kbu03009
]
Prokaryotic type
ribosomal protein modification factors
Q4V64_38520 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
WKX13105
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All DBs
Position
8573063..8574535
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AA seq
490 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLEADGWQLVKDAEDADVAVVNTCGFVDAAKKDS
VDALLEANDLKGHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYTDISDRLQTIL
NGGIHAAHTPRDRRKLLPISPAERQSVSDVALPGHGAPSDLPEGVAPVSGPRAPLRRRLD
GAPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLNETRWLAEQGVKEIMLVSENNT
SYGKDLGDIRLLESLLPELAEVDGIERVRVSYLQPAEMRPGLIDVLTSTPKIAPYFDLSF
QHSAPGVLRAMRRFGDTDRFLELLDTIRNKAPQAGVRSNFIVGFPGESEDDLAELERFLN
GARLDAIGVFGYSDEEGTEAATYDNKLDEDVVAERLARVSRLAEELVSQRAEERLGETLQ
VLVESVDSAEGVYGRGAHQAPETDGQVLLTSGEGLSVGRMVEAKVVGTEGVDLVAEPLQG
SLTCSEEAGR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaacgccgtaccgtcgcactcgtcactcttggctgcgcccgcaacgaggtggac
tcggaggagctcgcaggccgtttggaggcggacggctggcagctcgtgaaggacgccgag
gacgccgacgtcgccgtcgtcaacacctgtggcttcgtcgacgccgccaagaaggactcc
gtcgacgccctcctggaggccaacgacctcaaggggcacggcagaacccaggccgtcgtg
gcggtgggctgcatggccgagcggtacggcaaggagctcgccgaggccctccccgaggcc
gacggcgtgctcggcttcgacgactacaccgacatctccgaccgcctgcagaccatcctg
aacggcggcatccacgccgcgcacaccccgcgcgaccggcgcaagctgctgccgatcagc
cccgccgagcggcagtcggtgtccgacgtcgccctccccgggcacggtgccccgtccgac
ctgccggagggcgtggctccggtgtccggcccccgtgcgcccctgcgccgccgcctcgac
ggcgccccggtcgcctcggtgaagctcgcctccggctgcgaccggcgctgctccttctgc
gccatcccgtccttccgcggctccttcatctcgcgccgcccgagcgacgtgctgaacgag
acacggtggctggccgagcagggcgtcaaggagatcatgctggtctccgagaacaacacc
tcgtacggcaaggacctgggcgacatccgtctgctggagtcgctgctgcccgagctcgcg
gaggtcgacggcatcgagcgggtgcgcgtcagctacctccagccggccgagatgcgcccc
ggtctgatcgacgtgctcacctccaccccgaagatcgcgccctacttcgacctgtccttc
cagcactccgcccccggtgtgctgcgcgcgatgcgccgcttcggcgacaccgaccgcttc
ctggaactgctcgacacgatccggaacaaggcgccccaggccggcgtccgctccaacttc
atcgtgggtttccccggcgagtccgaggacgacctggccgagctggagcggttcctgaac
ggcgcgcggctggacgccatcggcgtcttcgggtactccgacgaggagggcacggaagcg
gcgacgtacgacaacaagctcgacgaggacgtcgtcgccgagcggctggcacgtgtctcc
cggctcgccgaggagctcgtctcgcagcgggccgaggagcggctcggcgagacgcttcag
gtgctggtcgagtccgtggactccgccgagggcgtgtacggccgtggggcgcaccaggcg
ccggagacggacggccaggtcctgctcacgagcggcgaagggctgagcgtcggtcgtatg
gtcgaggccaaggtggtcggtacggaaggtgtcgacctggtggccgagccgctgcagggc
tcgctcacgtgtagtgaggaggcgggcagatga
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