Candidatus Korarchaeum cryptofilum: Kcr_1523
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Entry
Kcr_1523 CDS
T00668
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
kcr
Candidatus Korarchaeum cryptofilum
Pathway
kcr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kcr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Kcr_1523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kcr03021
]
Kcr_1523
Enzymes [BR:
kcr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Kcr_1523
Transcription machinery [BR:
kcr03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Kcr_1523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
TF_Zn_Ribbon
Auto_anti-p27
A2L_zn_ribbon
Zn_Tnp_IS91
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ACB08269
UniProt:
B1L740
LinkDB
All DBs
Position
complement(1504214..1507579)
Genome browser
AA seq
1121 aa
AA seq
DB search
MLSKRSEVDFYPIVKAYFRERNLADVQIESFNRFLERGIQEVVDAFKEIELVENYKLILS
RVYVGRPEIDEYDGSSLPAMPNEIRLRNADYIAPIELEIKVYAGGMELKTERVRIGHLPI
MVKSKGCYLYGLDEKRLISKGEDPRDPGGYFIINGSERVLVMRDDIAPNKVIVEQTVAEN
KPYSHVAQIVSARAGLRTRLYLEYYMRDGTIKASTGALRGIPVAMLLKALGLERDEDIVD
AISSVDDEIRSEFLYSLDDVQRRAEEEGAQIITREEALDYIGRRLVQAVPRADRIRYAKE
YLRNNFLPHIGVSEEDNIVKAYFLAKMIEKLLKVVRGKLEPDDKDHFSNKRLRLSGTLMQ
EVFRDSFYQLVRKLKEKADEQLSSGVYDLDIRRIIQSQKLVTQRIIRAVATGAWPGGDLG
VSQNLERTNYIATLHHLRRVNSPLPAGLPLHEVRQTHGTSIGRLCPLETPEGTNVGLVRS
LAIFCDVTFGTDPEPIIELVLDWGAKPAKEAKPREVGSLTPVYVNGRLVAFTDKPEELVS
FLREKRAELNPEVNFIYNREEGAVFINADAGRMRRPLIPVSKLKEAMELLPKVDSGELSF
TDLVKMGVVELLDADEEEYAVVAQSIEEITDKHTHFDFAPYAMFGVAASQIPYAEHNNIP
RDIIGSNMVRQGLGEYLANWRLRFDSRAFLMFYPQRPIVETRGAEITGYNYRPSGQNLVV
ALLPMDGYNMDDALVMSKGAIDRGAARAVFFRTYETEARRHAIIEGDKFENPVALKKVSG
KKEEQYYQKLGEDGIVDPETYVEGGDVLIGKTSPPRFSPELTVGSGYPQYTFERRDTSIS
MRAWERGVVTDVLLATKTGGEKLVRVNVRETRPPELGDKFATRHGQKGVLGMIYRHEDMP
FTAQGIIPDIVLDPHTIPSRMTIGQLYEIIAGKVGALEGRFVDGTPFMSEPVEDLMEALV
KLGFEYSGEEIMYDGRTGRMIKAPVFIGISYYQRLKHMVRDKIHARARGQMQLLTRQPVE
GRARGGGLRLGEMEGEVLISHGAASVIRDRYIDQSDKTIIYVCKECGTIAFFNQKTNEFF
CPRCQSSVEVKPLITSYASKLFIEELMSGHVDVRLSVEEEI
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
ttgctatccaagaggagcgaggtggatttctatcccatagttaaggcttacttcagggag
aggaaccttgccgatgttcagatagagtcattcaacaggttcctggagaggggtatacag
gaagtagtcgatgctttcaaggagatagagttggtcgagaattacaagctcatactcagc
agggtatatgttggaaggcctgagatagatgagtacgatggttcctcactcccggcgatg
cccaatgagataaggttgaggaacgcagattacatagctcctatcgagctggagatcaag
gtatacgctggaggtatggagctcaagactgagagggtgaggataggccacctccccata
atggtgaaatctaagggatgctacctatatgggctagatgaaaagaggctaataagcaag
ggggaggatcccagggatccgggtggctatttcataataaacggctctgagagggtcctc
gtcatgagggacgatatagcaccgaataaagtgatagtcgagcagacagtggctgagaat
aagccctattcgcatgtagctcagatagtctcagctagagctggtctgaggaccaggcta
tacttagagtattacatgagggatgggacgataaaggcatccacgggagctctgaggggg
atcccggtagcgatgctccttaaggctctgggcttggagagggatgaggatatagtggat
gccatatcatccgtggatgatgagataaggagcgagttcctctacagcttggatgatgtt
cagaggagagctgaggaggaaggggcccagataataacgagggaggaggctctggattat
atagggaggaggctcgttcaagcggtccccagggcggataggataaggtacgccaaggag
tacctgaggaataacttcctcccccacataggggtgagtgaggaggataacatagtaaaa
gcttacttcctggcgaagatgatagagaagctgctcaaggtcgtcaggggtaagctagag
ccggacgataaggatcacttctcaaacaagaggctgaggctctcgggtactctcatgcag
gaagtattcagggattccttctaccagctggtcaggaagctcaaggagaaagctgatgag
cagttgagcagcggtgtctatgatctggatataaggaggataattcagagccagaagctc
gtcactcagaggataataagggctgtggctacaggtgcatggccaggaggggatctggga
gtcagccagaacctagagaggacgaattacatagctaccctgcatcacttgaggagggtc
aattcgcccctccccgctggcctcccgctccatgaagttaggcagactcatgggacgagc
atagggaggctttgccccctagagactcccgagggaacgaacgtaggactagtgaggagc
ttagctatattctgcgatgtcacattcgggacggatccggagcccataatagagttggtg
ctcgattggggcgcgaagccggctaaggaagcgaagccaagggaagtggggagcttaaca
cctgtatacgttaatgggaggctcgtagctttcacagataagcccgaggaacttgtgagc
ttcctcagggagaagagagccgagctcaacccagaggtcaatttcatatataatagggag
gaaggagccgtattcataaacgccgatgccgggaggatgaggaggcccctcataccggtc
agcaagctgaaggaagctatggagctccttccgaaggtggattcgggtgagctgagcttc
accgatctcgtgaagatgggtgtagttgagctcctagatgccgatgaggaggaatacgct
gtcgttgctcagagcattgaggagataactgataagcacacgcacttcgacttcgccccc
tacgctatgttcggcgtagctgcatcccagataccttacgctgagcacaacaacatacct
agggatataataggctctaatatggtgaggcagggactaggggagtatctagctaactgg
aggctcagattcgatagcagggcattcctcatgttctatccgcagaggccaatagttgag
acgagaggggctgagataactggctacaattacaggccctccggccagaacttggtcgtc
gccctccttccgatggacggatataacatggatgacgcgctggtgatgtccaagggggct
atagacaggggagcagctagagctgtgttcttcaggacttatgagacggaagcgaggagg
catgccataatagagggagataagttcgagaatccagtagccctgaagaaggtctcgggc
aagaaggaggagcagtactatcagaagctgggtgaggatggcatagtggatcccgaaact
tatgtagagggaggggatgtcctcatagggaagaccagccccccgaggttctcacccgag
ctgaccgtgggtagcgggtacccgcagtacaccttcgagaggagagatacctctatctca
atgagggcctgggagaggggagtggtcacagacgtattactagctactaagacgggtggg
gagaagctcgtaagagtgaacgtgagggaaacgaggcctcctgaactaggtgataagttc
gctactaggcatgggcagaaaggtgttctcgggatgatatacaggcatgaggacatgccc
ttcacagctcaggggataattccggatatagtcctggatcctcacacgataccttccagg
atgactataggccagctctacgagataatagctggcaaggtcggggctctggaggggagg
ttcgtggatgggactccgttcatgtcagagcccgttgaggatttgatggaggcattggtc
aagctgggattcgagtacagcggggaggagataatgtacgatgggaggaccgggaggatg
ataaaggcccccgtcttcatagggataagctactaccagaggctcaagcacatggtgagg
gataagatacatgcgagagctagggggcagatgcaactcctcacgaggcagccggttgag
ggaagggccaggggaggagggctcaggctcggcgagatggagggcgaagttttgatatcg
cacggagctgcttccgtcataagggataggtacatagatcagtccgataagacgataatt
tacgtctgtaaggagtgcggaacgatagcgttcttcaatcagaagactaacgagttcttc
tgcccgaggtgccagtcctcagttgaagttaagcccctgataactagctacgcctcgaag
ctattcatagaggagctgatgagcgggcacgtagatgtgaggctcagcgtggaggaggag
atatag
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