Kluyvera cryocrescens: RIN60_00850
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Entry
RIN60_00850 CDS
T09399
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
kcy
Kluyvera cryocrescens
Pathway
kcy00540
Lipopolysaccharide biosynthesis
kcy01100
Metabolic pathways
kcy01250
Biosynthesis of nucleotide sugars
Module
kcy_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RIN60_00850 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kcy01005
]
RIN60_00850 (rfaD)
Enzymes [BR:
kcy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
RIN60_00850 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
kcy01005
]
Core region
RIN60_00850 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
WNN71950
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All DBs
Position
complement(174804..175736)
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDITDYMDKEDFLIQI
MAGEELGDIEAVFHEGACSSTTEWDGKYVMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREFEKPLNVYGYSKFLFDEYVRRIMPEVDSPIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVAAVNLWFWENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgctggcttcatcggcagcaacatcgtgaaagcgctcaat
gacaaaggcatcactgacattctggtggtggataacctgaaagacggcaccaagttcgtc
aacctggtcgatctcgacatcaccgattacatggataaagaagattttctgatccagatt
atggccggtgaagagctcggtgacatcgaagccgtattccacgaaggcgcctgctcctcc
accaccgagtgggacggtaagtacgtgatggataataactatcagtactccaaagagctg
ctgcactactgcctggagcgtgaaattccgttcctgtacgcctcttctgcagccacctac
ggcggacgcaccagcgactttatcgagtcccgtgaatttgaaaagccgctcaacgtttac
ggctactccaaattcctgttcgacgaatacgttcgccgcatcatgccagaagtcgactcc
cccattgttggcttccgttacttcaacgtctatggcccgcgcgaaggccacaaaggcagc
atggcgagcgtggctttccacctcaacacccagttgaacaatggcgaaagcccgaaactg
ttcgaaggcagcgatggcttcaagcgtgatttcgtctacgtgggtgacgtagcggcggtg
aacctgtggttctgggaaaacggcgtctccggcattttcaacctcggtaccggccgcgcg
gaatccttccaggctgtggctgacgcgacgctggcgtaccacaaaaaaggcagcattgag
tacattccattcccggataaactgaaaggccgctatcaggcgtttactcaggccgatctg
accaacctgcgtgctgcgggctacgataagccatttaagaccgtcgccgaaggcgttacg
gaatatatggcttggttgaaccgcgacgcgtaa
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