Kluyvera cryocrescens: RIN60_16415
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Entry
RIN60_16415 CDS
T09399
Symbol
speF
Name
(GenBank) ornithine decarboxylase SpeF
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
kcy
Kluyvera cryocrescens
Pathway
kcy00330
Arginine and proline metabolism
kcy00480
Glutathione metabolism
kcy01100
Metabolic pathways
kcy01110
Biosynthesis of secondary metabolites
kcy04148
Efferocytosis
Module
kcy_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
kcy00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
RIN60_16415 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
RIN60_16415 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
RIN60_16415 (speF)
Enzymes [BR:
kcy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
RIN60_16415 (speF)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WNN70636
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Position
3447254..3449449
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AA seq
731 aa
AA seq
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MSELKIAVSRTCPDCFTTQRTIINTCDTNFIDVAAAVLSIEDIECGKLDEIDATGYNLPV
FIAINKEQIVPSEYLSRIQGVFEHDETRNDFYGRQLEAAAHKYEVQLRPPFFSALVDYVA
QGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGETLFRSDLCNADVAMGDLLIHEGAPCIAQ
QHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVLFDRNNHKSNHHGALLQAGATPV
YLETARNPYGFIGGIDAHCFEESYLRELVAEVAPNRARNERPFRLAVIQLGTYDGTIYNA
RQVVDKIGHLCDYILFDSAWVGYEQFIPMMADCSPLLLELNENDPGILVTQSVHKQQAGF
SQTSQIHKKDSHIKGQQRYVPHKRLNNAFMMHASTSPFYPLFAALDINAKMHEGQAGRNM
WMDCVSNGIEARKLILDNCHHIRPFVPEQVDGKPWQSFETKEIANDLRFFHFVPGERWHG
FEGYAEHQYFVDPCKLLLTTPGIDANGEYDTFGVPATILANFLREHGVVPEKCDLNSILF
LLTPAEDMAKLQQLVALLVRFEALLEADAPLKDVLPSLYGQHKDRYADYTLRQLCQEMHN
LYARHNVKQLQKEMFRKSHFPRVSMNPQDANYAYLRGEVELVPLSQAEGRIAAEGALPYP
PGVLCVVPGEIWGDSVLRYFTALEEGINLLPGFAPELQGVYIQENDGRKQVWCYVIESQL
PQPALLKGEKL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattaaaaattgccgtcagccgtacatgcccggactgttttactacccagcgc
acgattatcaatacctgcgacacgaattttattgatgttgccgccgccgtattatctatt
gaagacattgagtgcggtaaactcgatgaaatagatgccacgggttataacctgccagtt
tttattgctattaataaagaacaaatcgtcccatctgaatatctctcacgtattcaaggg
gtatttgaacatgatgaaacgcgcaatgacttctatggtcgtcaactggaagccgctgcg
cacaagtatgaagtgcaactgcgtccgccattctttagcgcattggttgattacgtcgcg
caaggtaacagcgcatttgactgcccggggcaccagggcggtgaattcttccgccgtcac
ccggccggtaaccagttcgttgaatactttggcgaaacactattccgctctgacctgtgt
aacgccgacgtcgccatgggtgacctgctgattcacgaaggtgcaccatgcatcgcccaa
cagcacgctgcgaaagtatttaacgccgataaaacctatttcgtcctgaacggaacctcc
tcttccaacaaagtagtgctgaatgcgctgctgacgccaggggatttggtcctgtttgac
cgtaacaaccacaagtccaaccaccacggtgcgctgttacaggctggggcaacgccggtg
tatctggaaaccgcacgtaacccgtacggctttatcggcggtattgatgctcactgcttc
gaagagagctacctgcgtgaactggttgctgaagtggcgccaaatcgcgcacgtaatgaa
cgtccgttccgcttggcggtgattcagctcggcacctatgacggcaccatttataacgcc
cgtcaggtcgtcgataaaattggtcatctgtgcgattacattctgtttgactccgcctgg
gtgggttacgaacagtttattccgatgatggccgactgctcgccgctgctgcttgagctg
aacgaaaatgaccctggtattctggtcactcagtccgtgcacaaacagcaggccggtttc
tcccaaacgtcgcaaatccacaaaaaagacagccatattaaaggccagcagcgctacgtt
ccacataagcgtctgaacaacgcctttatgatgcacgcctccaccagcccgttctaccca
ctgtttgccgccctggatatcaacgccaaaatgcatgaaggtcaggctggccgcaacatg
tggatggactgcgtctctaacggtatcgaagcccgtaagctgatcctcgataactgccac
cacattcgcccgtttgttccagaacaggttgacggtaaaccatggcagtcctttgaaacc
aaagagatcgccaatgacctgcgcttcttccacttcgtccctggcgaacgctggcatggt
tttgaaggttatgcggagcatcagtactttgtcgacccatgcaaattgctgctgaccacg
ccgggtatcgatgctaacggtgaatacgacacctttggcgtaccggcgaccattctggcg
aacttcctgcgtgagcacggtgtggtacccgaaaaatgcgacctgaactccatcctgttc
ctgctgacgccagccgaggatatggctaagttgcagcaactggtggccctgttggtccgt
ttcgaagcgctgttggaagccgatgccccgctgaaagatgtactgccatcactctacggt
cagcataaagatcgctatgccgattacaccctgcgccagctgtgccaggagatgcataac
ctgtatgcccgtcataacgtgaaacagctgcaaaaagagatgttccgtaaatcacacttc
ccgcgcgtcagcatgaatccgcaggatgccaactacgcctatctgcgtggtgaagtcgag
ctggtccctctgtcacaggcagaaggtcgtatcgccgccgaaggtgctctgccatatcct
ccaggagtgctgtgcgtcgtccctggtgaaatctggggtgactctgtactgcgttacttc
accgcgctggaagaagggatcaacctgctgccgggctttgcgccggaactgcagggtgtt
tatatccaggaaaatgacggtcgcaaacaggtgtggtgctacgtcattgaatctcagctg
ccgcaacctgcgctgcttaaaggtgagaaattatga
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