Dokdonia sp. 4H-3-7-5: Krodi_0563
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Entry
Krodi_0563 CDS
T01484
Name
(GenBank) glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00260
Glycine, serine and threonine metabolism
kdi00630
Glyoxylate and dicarboxylate metabolism
kdi00785
Lipoic acid metabolism
kdi01100
Metabolic pathways
kdi01110
Biosynthesis of secondary metabolites
kdi01200
Carbon metabolism
Module
kdi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Krodi_0563
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Krodi_0563
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Krodi_0563
Enzymes [BR:
kdi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Krodi_0563
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
CbiG_C
Motif
Other DBs
NCBI-ProteinID:
AEE18548
UniProt:
F4B1N2
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Position
638488..641337
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AA seq
949 aa
AA seq
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MNTDSFALRHIGPRRSDLPEMLKTVGAETIEQLIFETIPDNIRLENNLTLDPALSEHEFA
AHITALSNKNKVFRSFIGLGYNQAITPAVIQRNILENPGWYTAYTPYQAEIAQGRLEALL
NYQTMITDLTGMELANASLLDESTAAAEAMALLFSVRSRDQKKADVNKFFVSEEILPQTL
SLLQTRATPIGVELVVGNHEEFDFSKEFFGAILQYPGVSGKVFDYADFVANANAADIKVA
VAADILSLVKLRAPGEFGVDVVVGTTQRFGIPLGYGGPHAAYFATKEEYKRSIPGRIIGV
TKDTDGKRALRMALQTREQHIKRDKATSNICTAQVLLAVMAGMYGVYHGPEGLKNIANKV
HNTTATVADALEQLGLYQTNESYFDTIQIKADAAKVAAVAQEMEINFHYPDAETVAISIH
EATTLQDVNDIISAFAKAYSKETIVISEIAEGNAIPASVARETSFLQLPVFNTYHSETEL
MRYIKKLERKDLSLNHSMISLGSCTMKLNAASEMLPLSDPQWGNMHPFAPLDQAEGYQTM
LKKLEDQLTEITGFAGTSLQPNSGAQGEYAGLMVIRAYHESRGDSHRNICLIPSSAHGTN
PASAVMAGMKVVVTKALENGNIDVDDLREKAEKHKDNLAALMITYPSTHGVYESAVKEIT
SLIHEHGGQVYMDGANMNAQVALTNPGAIGADVCHLNLHKTFAIPHGGGGPGVGPICVAK
QLVPFLPTNPVITTGGEQAITAISAAPWGSALACLISYGYITMLGEPGLRHSTEYAILNA
NYIKERLDGAYQCLYVGERGRAAHEMIIDCRPFKAHGIEVTDIAKRLMDYGFHAPTVSFP
VAGTMMIEPTESESKEELDRFCEAMLSIRKEIDTASSDEPNHIMKNAPHTLAMVTADTWE
FSYSREKAAYPLSYVAENKFWPTVRRVDDAYGDRNLICTCAPIEEYMEA
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagattcgtttgcattacgccatataggcccgcgtagaagtgatcttcctgag
atgcttaaaaccgtaggcgctgaaactatcgagcaactcatatttgagactattcctgat
aacattagacttgagaacaaccttacgctagaccctgcgctaagcgagcatgagtttgct
gcacatatcacagcactgtctaataaaaacaaagtttttagatcttttataggtctagga
tacaaccaagcgattacaccagcggtaatacagcgtaatattctagaaaatccgggatgg
tacacggcttacacgccttaccaagcagagattgctcaagggcgtctagaagcattgctt
aactaccagaccatgatcacagatcttacaggtatggagcttgcaaatgcatctttactt
gacgagtctaccgcagctgcagaggcaatggcattgctgttttctgtacgtagccgtgat
cagaaaaaggcagacgtaaataaattctttgtatctgaagagattttacctcaaacgctt
tctttattacaaacacgtgcaaccccaattggtgttgaattagtagtaggaaatcacgaa
gaatttgatttttctaaagagttctttggagccatcttacaatatccaggtgtatctgga
aaagtatttgactacgcagattttgtagcaaatgcaaatgcagcagatattaaagtagct
gtagcagcagatatattgagccttgtaaaactgcgcgctccaggagaatttggagtagac
gtggtagtaggtactacgcaacgttttggtattccattaggatacggaggtcctcacgca
gcatactttgctactaaggaagaatataaaagaagcatcccaggacgtatcattggagta
acaaaagatactgatggtaagcgtgccctgcgtatggcgcttcaaacgcgtgagcaacac
atcaaacgtgataaggcaacttcaaacatctgtactgctcaggtattacttgctgttatg
gcgggaatgtacggtgtatatcacggtccagaaggattaaaaaatatagcaaataaggtt
cacaacactacagctactgttgcagatgcacttgaacaactaggattgtatcaaacaaac
gagagttattttgataccatacaaataaaagcagatgctgctaaagtagctgccgtagca
caagaaatggaaatcaacttccattacccagatgcagagaccgtggcaatctctatacat
gaagctaccaccttacaagatgtaaatgatatcatttccgctttcgcgaaagcgtactca
aaagaaactatcgttatatctgaaattgccgaaggaaacgcgattcctgcaagtgtagct
cgtgagacttcatttttacaacttccagtatttaacacctatcattctgaaacagaattg
atgcgttacatcaaaaaactagagcgtaaagatttatcattaaatcactcaatgatatcc
ctaggttcttgtacaatgaagcttaatgcagcgtctgaaatgttaccactttctgatccg
caatgggggaatatgcacccatttgcaccattagatcaggcagaaggataccagactatg
cttaaaaaacttgaagatcaacttacggagattacaggttttgcaggtacatcattacaa
cctaactctggcgctcaaggagagtatgccggactgatggtaatacgtgcataccacgaa
tctcgtggagacagccacagaaacatctgccttatcccatcatctgcacacggaaccaat
cctgcaagtgcagtaatggctggtatgaaagtagtagttacaaaagcactagaaaacgga
aacatcgatgtagatgatttacgtgaaaaagcagagaagcacaaagacaaccttgcggca
cttatgatcacatacccatctacgcatggagtatatgaaagcgctgtaaaagaaatcaca
tcactcatacatgagcatggtggtcaagtatatatggatggtgcaaacatgaatgcacaa
gttgcccttacaaatccaggagcaattggcgcagatgtatgtcacttaaacctacacaaa
acgtttgctattcctcacggaggaggtggcccaggagtaggacctatatgtgttgcaaag
caactagttcctttcttacctactaacccagtaattactacaggtggtgagcaagccatt
actgcaataagcgcagctccatggggatctgcacttgcatgtcttatatcttacggatac
atcactatgctaggtgagccaggattacgtcactctactgagtatgctattcttaatgca
aactacatcaaagagcgtcttgacggcgcttaccaatgtttatatgtaggagaacgcggt
cgtgctgcacacgagatgattatagactgtcgtccatttaaagctcatggtatcgaagta
acagatatcgcaaagcgtcttatggattatggtttccacgctcctacggtttctttccca
gtagcaggaactatgatgatagaacctacagaaagtgaaagcaaagaagaactagatcgt
ttttgtgaagcaatgctttctattagaaaggaaattgacacagcaagttctgatgagcct
aaccacattatgaaaaatgcaccgcatacactagctatggtcactgcagatacttgggag
ttctcatactctagagagaaagccgcttacccgctaagctatgttgcagaaaataaattc
tggcctactgtgcgtcgtgtagatgacgcttatggtgatcgtaatttaatatgtacttgt
gctcctattgaggaatacatggaagcataa
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