Pantoea rwandensis: LH22_01625
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Entry
LH22_01625 CDS
T03331
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
kln
Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:
kln00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
LH22_01625
Enzymes [BR:
kln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
LH22_01625
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Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Motif
Other DBs
NCBI-ProteinID:
AIR84221
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All DBs
Position
complement(364352..366367)
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AA seq
671 aa
AA seq
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MLRVSRSLTIKQMATVSAVAMVTISIFIVIQLFHFVQQRRIDYAQQMENIAHTVRQPLSE
AVLKGDIPQAERILNTLKPAGILSRADVVLPNAFQALHADFVPEKPVPRFVARLFELPVQ
ITLPLYSVERTGLPKPIAYLVLQADSSRVYQFLLSTLSTMITTYLLLALILSVSISWCIN
RLIVHPLRNLSRDLQELPPQAILTHKLDLPNNHRDDEIGMLIRSYNRNQQVLESIHDEMS
RMTTHFAVTDLPNRALFLALLDQHASHRHSRQPWGLMVIRIETLQEANGVLSDEQRDTLM
LTLVEKIRSTVDDHTLLAQTGPSDFALLMKRAHNPFRAMRLARNLMIRINQPVNLHQLQL
RPNASIGLALHDDSVVSASEQLDRATSAMMSARHQGKNQILFFDPALTERAQKRLTQEHD
ILQGLQDGQFALYLQPQINMQTGELAGAEALLRMRMPDGSYGLSEEFIASAEEIGVISAI
GRWVFEEACRILAAWQKLGINIPLSVNISAVQLRDPSMVSHLQGLLERHRIAPGNFVLEI
TETAQIGDAEQAISLLRSLQQTGVAVALDDFGMGYSNLNYLHQFKALPVNKLKMDRSFVA
ALPDDDTMVRIVAAIADIIHLDVIAEGVETDEQRDWLLARGITIGQGYLYAEALSLNVFN
QRWLDSSSHPE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcgcgttagtcgctcgttaacgataaaacagatggcaacggtgtccgccgtggca
atggtgaccatcagcatttttatcgtcatccagttattccactttgtgcagcagcgcagg
attgactacgcccagcagatggaaaatatcgcgcacacggtgcgccaaccgctgtcagaa
gccgttctgaaaggcgatattccgcaagccgaacgcatccttaatacactgaaaccggcg
ggcatcctgtctcgtgccgatgtggtattgccgaatgcgtttcaggcgctgcacgccgat
tttgtgccggaaaaaccggtgccgcgttttgtggcgcgtctgtttgagctgccggtgcaa
attaccctaccgctctattcagttgaacgcaccgggctgcccaaaccgattgcctatctg
gtgctgcaggctgactcgtcgcgcgtttatcagtttctgctgagcacgttatcgacgatg
atcaccacctatttgctgctggcgctgatcctctcggtgtcgattagctggtgtatcaat
cgcttgattgttcacccgttacgtaatctgtcgcgtgatttgcaggagttgccgccgcag
gccatcctcacgcacaagctcgatctgccgaataatcatcgcgacgatgaaatcggtatg
ctgattcgcagttacaatcgcaatcagcaggtgctggagtcgattcatgatgaaatgagt
cgcatgaccacccattttgctgtgaccgacctgcccaaccgtgccctgttccttgcgtta
ctggatcagcacgccagccatcgccatagccgtcagccgtggggattgatggtgattcgt
atcgaaacgctgcaggaagccaacggtgtactgagtgatgaacagcgcgataccctgatg
ctgacgctggtggagaagattcgcagcaccgttgacgatcacaccctgctggcgcaaacc
ggacccagtgatttcgcgctactgatgaagcgtgcgcacaacccgttccgcgccatgcgc
cttgcgcgtaacctgatgattcgcatcaaccagccggtgaatttacatcagttacaactg
cgcccaaacgccagtattggtctggcgctgcatgatgacagcgttgtcagcgccagcgag
caactcgaccgcgcgacctcggcaatgatgtcggcgcgtcatcagggcaaaaaccagatt
ctgttctttgatccggcgctgactgagcgggcgcaaaaacgcctgacgcaggagcacgat
atcctgcaggggttgcaggatggtcaatttgcactttacctgcagccgcaaatcaatatg
caaaccggtgagctggcgggtgcggaagcgctattgcgtatgcgtatgccggatggcagc
tatggtttgtcagaagagtttattgccagcgcggaagagattggggtgatttccgcgatt
gggcgctgggtgtttgaagaagcctgccgcatccttgccgcgtggcagaagctgggtatc
aatattccgctgagcgtcaatatttcggcagtgcagttgcgtgaccccagcatggtgagc
catttgcagggcttgctggagcgccatcgtattgcacctggcaatttcgtgctggaaatt
accgaaaccgcgcagattggcgatgccgagcaagcgatttcgctgctgcgttcactgcag
caaaccggcgtggccgtggcgctggatgattttggcatgggttattccaatctcaattac
ctgcatcagtttaaagcgctgccggtgaacaagctgaagatggaccgcagttttgttgcg
gcgctaccggatgatgacaccatggtgcgtattgtcgcggcgattgcggacatcattcat
cttgatgttattgctgaaggcgtggaaaccgatgagcagcgagactggctgctggcacgc
ggaattacgatagggcaaggctacttatacgctgaagcgctctctctcaacgtcttcaac
caacgctggcttgacagctcgtcacatcctgaataa
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