Klebsiella michiganensis RC10: VW41_00045
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Entry
VW41_00045 CDS
T03782
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kmi
Klebsiella michiganensis RC10
Pathway
kmi03030
DNA replication
kmi03410
Base excision repair
kmi03420
Nucleotide excision repair
kmi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VW41_00045
03410 Base excision repair
VW41_00045
03420 Nucleotide excision repair
VW41_00045
03440 Homologous recombination
VW41_00045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kmi03032
]
VW41_00045
03400 DNA repair and recombination proteins [BR:
kmi03400
]
VW41_00045
Enzymes [BR:
kmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VW41_00045
DNA replication proteins [BR:
kmi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VW41_00045
DNA repair and recombination proteins [BR:
kmi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VW41_00045
NER (nucleotide excision repair)
GGR (global genome repair) factors
VW41_00045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH
HHH_5
Prok-E2_E
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AJZ87545
LinkDB
All DBs
Position
7688..10474
Genome browser
AA seq
928 aa
AA seq
DB search
MVQIADNPLILVDGSSYLYRAYHAFPPLTNSRGEPTGAMYGVLNMLRSLILQYQPTHAAV
VFDAKGKTFRDELFEDYKSHRPPMPDDLRAQIEPLHAMVKAMGLPLLAVSGVEADDVIGT
LALEAEKAGRPVLISTGDKDMAQLVTPGVTLINTMTNTILGPEEVQTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYATPEKIAELSFRGAKTMAAKLEQSK
ELAYLSYKLATIKTDVELELGCEQLEVQQPAADELLALFKQYEFKRWITDVEAGKWMQAK
GAKPTAQPQKAAEVDAEPEAPASQLSYDNYITILDEKVLVEWIERLKKAPLFAFDTETDS
LDNVSARLVGLSFATEPGVACYIPVAHDYLDAPEQISSARALELLKPLLEDENALKVGQN
LKYDRGIMQNYGIELRGIAFDTMLESYTLDSVAGRHDMDSLAERWLKHQTISFEEIAGKG
KKQLTFNQIDLETAGRYAAEDADVTLQLHLKMWPKLEKVAGPLNIFKNVEMPLVPVISRI
ERNGVKIDPAILHAHSGELTKRLAELELKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMISPITGRVHTSYH
QAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVILSADYSQIELRIMAHLSRD
KGLLSAFAEGKDIHRATAAEVFGLPLESVTGEQRRSAKAINFGLIYGMSAFGLSRQLNIP
RKESQKYMDLYFERYPGVLEYMERTRAQAKYQGYVETLDGRRLYLPDINSSNGARRAGAE
RAAINAPMQGTAADIIKRAMIAVDAWLETEKPRVKMIMQVHDELVFEVHKDDVEAVSKKV
HELMESSMKLDVPLLVEVGSGKNWDEAH
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggtccagatcgcagacaacccgcttatcctcgttgatggctcctcctatctttatcgg
gcatatcacgccttcccaccgttgacgaacagccgtggcgagccaacaggggcgatgtac
ggcgtgctgaacatgctgcgtagcctgattttgcaataccagccgacgcacgctgccgtg
gtgtttgatgccaaaggcaaaacgttccgtgatgagttgtttgaggactataaatcgcat
cgccccccaatgccggacgatctcagagcgcagattgagccgctgcacgcgatggttaaa
gcgatgggcctgcctttactggccgtgtcaggcgttgaagctgatgacgttattggtacg
ctggcgctggaggctgaaaaagccggtcgcccggtgttgatcagtaccggtgataaagac
atggcgcagctggtgacgccgggcgtgacgctgattaacaccatgaccaacaccattctt
gggccggaagaggtgcagacaaaatacggcgtgcctccggagttgattatcgacttcctg
gcgctgatgggggattcttcggacaatattcctggcgtgccgggcgtaggtgaaaaaacg
gcacaggcgctgcttcaggggctgggtgggctggatacgctttacgccaccccggaaaaa
attgccgaactctccttccgtggggcgaaaaccatggccgctaagctcgaacagagcaaa
gagctggcctatctctcctacaagcttgctaccatcaagaccgacgttgagctggaactg
ggctgtgaacagcttgaagtccagcagccggcggcagacgaactgttggcactctttaag
cagtatgaattcaaacgctggataaccgacgtagaagccgggaaatggatgcaggctaaa
ggggctaaaccgaccgcgcagccgcagaaagccgcggaggttgacgctgaacccgaagcg
ccagccagccaactctcttatgacaactacatcactatcctcgatgagaaggtgctggtt
gaatggattgaacggctgaaaaaagcgccgctctttgcgtttgataccgagaccgacagc
ctggacaacgtcagtgccaggctggtggggctctccttcgccacggaaccaggcgtggcc
tgttatatccccgtcgcacatgattatcttgatgctccagagcagatttccagcgcgcgc
gcgctggagttacttaagccgctgctggaagacgagaacgcactgaaagtcgggcaaaac
ctgaaatacgatcgcggcatcatgcagaactatggcattgagctacggggcatcgctttt
gacaccatgctggaatcctacacgctggacagcgttgcaggccgccatgatatggacagc
ctggccgaacgctggctgaagcaccaaaccatctcctttgaagagattgccggcaaaggc
aaaaaacagctgacctttaaccagatcgatctggaaactgccgggcgctatgcggcagaa
gacgccgacgtcaccctgcagctgcatctgaagatgtggccgaagctcgagaaggttgca
ggcccactcaacatctttaaaaacgttgaaatgccgctggtgccggtgatttcacgcatt
gaacgcaacggcgttaaaatcgacccggctattttgcacgcgcattctggcgagctgact
aaacgtctggctgagcttgagctgaaggcgcatgaaatcgccggggaagagttcaatctc
tcttctacgaagcagctgcaaaccattctttttgaaaagcaaggcattaagccgctgaag
aaaacgccgggcggcgcgccgtcgacgtctgaagaggtacttgaagaactggcgctcgac
tatccgctgcctaaagtgattctggaataccgtggccttgcgaagctgaaatccacctat
accgacaagttaccgctgatgattagcccgataaccgggcgcgtgcatacgtcttatcac
caggcggtcacggccaccgggcgtttatcctctaccgatcctaacctgcagaacattcct
gttcgcaacgaggaagggcgccgtattcgccaggcctttattgcgcctgaggattacgtg
attctttctgcggactactcacaaattgaactgcgcatcatggcccatctctcccgcgac
aaaggtctgttaagcgcctttgcagaaggaaaagatatccaccgcgccaccgctgcggaa
gtctttgggctgcctctggaaagcgttaccggagagcagcgtcgcagcgcgaaggcgatt
aactttggtctgatctacgggatgagcgcatttggtctttcccgccagctcaacatcccg
cgcaaagagtcccagaagtatatggatctctacttcgagcgttatcctggcgtgctggag
tacatggagcgtacgcgtgctcaggcgaaatatcagggctatgttgagacgctggatggc
cgccgtctctacctgccggatatcaattccagcaacggcgctcgccgtgccggtgcggaa
cgtgccgcgattaacgccccgatgcagggtaccgccgccgatatcatcaagcgcgcgatg
atcgctgtcgatgcctggctggagacagaaaagcctcgggtgaaaatgatcatgcaggtg
cacgatgaattggtgttcgaagtgcataaagacgacgtggaagcggtgtctaaaaaggta
catgagctgatggaaagcagcatgaagctcgacgtgccgctgctggtggaagtgggcagc
ggtaagaactgggatgaggcgcattaa
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