Klebsiella michiganensis RC10: VW41_12090
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Entry
VW41_12090 CDS
T03782
Name
(GenBank) RNase II stability modulator
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
kmi
Klebsiella michiganensis RC10
Pathway
kmi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kmi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VW41_12090
Enzymes [BR:
kmi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VW41_12090
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
PAS_10
GGDEF_2
DUF4478
Pro-rich_19
Motif
Other DBs
NCBI-ProteinID:
AJZ89721
LinkDB
All DBs
Position
2587958..2589949
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AA seq
663 aa
AA seq
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MKDDLEQNLLYRYLGTTSPYWRLPADSNALQLAASEDSDTGQVVALDAKQADEIRQMTVI
TSSLTMTLSLFGIDVPVHMVGRKVSKREWAGTASAWHDTHSVARDLVQGLSFAEQVVSEA
NSVIVILDKQGNIQRFNRLSEEYTGMKEHEVIGQNVFRLFMSRSEAAASKRNISGFFRNG
SSYEVERWVKTRKGQRLFLFRNKFVHSGSGKNEIYLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAIYDLIADAIAKRGDTQVGIVYLDLDNFKKVNDAYGHMFGDQLLQAVSLAI
LSCLEEGQVLARLGGDEFIVLATNTSQGSLEAMSSRILTRLKQPFRIGLIEVYSGCSLGI
SLAPQHGDERENLIRNADTAMYTAKESGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKMTWRGEVRSLEALVRWQSPERGLIPPQGFISYAEESGLIVPLGRWVMVSVV
QQVAKWRDKGINLRVAVNVSARQLADQTIFSDLRQALKDLNFEYCPIDVDLTESCLIENE
DLALSVIKQFSQLGAQVHLDDFGTGYSSLSQLARFPIDAIKLDQSFVRDVHKHSVSQSLV
RAIVAVAQALNLQVIAEGVENQKEDAFLTKNGVNERQGFLFAKPMPAAVFERWFKRYQAR
TKR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgatttggagcagaacctgctttatcgttatctgggtacgaccagcccctac
tggcgtttaccggcggacagcaacgcccttcaactggcagccagtgaagattcagacacc
ggccaggttgtggcgctggacgcaaaacaggccgacgaaattcgccaaatgacggtgatc
acctccagcctgaccatgacgctgtcgctgttcggcatagacgttccggtacatatggtg
ggccgaaaagtgtctaaacgcgaatgggcaggcaccgcttcggcctggcatgatacccat
tcggtggcgcgggacctggtgcagggcctctcgtttgccgaacaggttgtttctgaagcc
aattcggtgatagtcattcttgataaacagggaaatattcagcgcttcaaccggctaagt
gaagaatacaccgggatgaaagagcatgaagtcatcggccagaacgtcttcaggctgttt
atgagccgcagcgaagccgccgcctcaaagcgcaatatcagcggatttttccgcaacggt
agctcctacgaggttgagcgttgggtcaaaactcgtaaaggccagcggctatttttgttc
cgcaacaagtttgtgcacagcggcagcggtaaaaacgaaatctacctgatttgctccggc
accgacattaccgaagagcgccgcgcgcaggagcgcctgcgggtgctggccaataccgat
accatcaccggcttgcctaaccgcaacgctatttacgatctgatcgccgatgctatcgcc
aaacgtggcgacacacaggttggcatcgtttatctggatctcgataactttaaaaaagtg
aacgatgcctacggtcatatgttcggcgatcagctgctgcaggccgtatcactggcgatt
ttaagctgccttgaggaaggccaggtgttggcgcgtctcggaggcgatgaattcatcgtg
ctggcgacaaacacctctcagggctcgctggaagcgatgtcttcccgcattttgacccgc
ctgaagcagcccttcagaattggccttattgaggtctacagcggctgttctctaggcata
tcccttgcgccccagcacggggatgagcgagagaatctgattcgcaatgccgacacggca
atgtacaccgccaaagagagcggccgcgggaagttttgcgtgttctcgcccgagatgaac
cagcgggtgtttgaatatctctggctggataccaatttacgtaaagcgctggataacgat
caattggtgattcattaccagccaaagatgacctggcgcggtgaagtccgtagcctggag
gcactggtgcgctggcagtcaccggagcgtggccttattcctccccaggggtttatttct
tacgcggaagagtccggcctgattgtgcctcttgggcgctgggtaatggttagcgttgtt
cagcaggtagcaaaatggcgggacaaaggtattaatttgcgtgtggcggtcaacgtttct
gcccgtcagcttgctgaccagactatttttagcgatctcaggcaggcgctgaaagatttg
aattttgaatactgcccgattgacgttgatctgaccgaaagttgtcttatcgagaacgaa
gatctggcgctgtcggtgatcaagcagttcagccagctgggagcacaggttcacctggat
gacttcggtaccggctattcgtcgctatcgcagctggcccgcttccctatcgatgccatc
aagttggatcagtctttcgtacgcgacgtgcacaaacattcggtgtctcaatcgctggtg
agagccattgtggccgtggctcaggcgctgaatctgcaggtgattgcggagggagttgaa
aaccaaaaagaagacgcctttctgaccaagaacggcgtcaacgaacggcagggattttta
tttgcaaaaccaatgcccgcagccgtattcgagcggtggtttaagcgctatcaggccaga
acaaagcgttag
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