Kryptolebias marmoratus (mangrove rivulus): 108232668
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Entry
108232668 CDS
T05608
Symbol
setd1ba
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr00310
Lysine degradation
kmr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108232668 (setd1ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kmr03036
]
108232668 (setd1ba)
Enzymes [BR:
kmr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
108232668 (setd1ba)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108232668 (setd1ba)
HMT complexes
COMPASS/SET1 complex
108232668 (setd1ba)
COMPASS/SET1 complex (yeast)
108232668 (setd1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
108232668
NCBI-ProteinID:
XP_017266074
LinkDB
All DBs
Position
LG14:complement(17492805..17506421)
Genome browser
AA seq
1819 aa
AA seq
DB search
MSKPGERNRLNEDHGRKQSSSLANGMDGHPVCSSAEKRSHHWRSYKLIIDPALKKGSHKL
YRYDGQTFSMPNPGIPPVDVVRDPRIGRLWTKYKETDLPVPKFKIDECYVGPVPPKEVTF
ARLNDNIREGFLMDMCKKFGDIEEVEILYNPKNKKHLGIAKVVFENVKAAKVAVQSLHNT
SVMGNIIHVELDPKGENRLRYFQLLMNGSYTPRTLPVGGEETREVSPLSLAEALLACEPI
RRLSESNISSVAGALPPSSSTTPLSLETGYSSLKQDTPQSQGTPRQPGTPFSQDSSYSSR
QSTPAYQSSRPESSGGYKSRRHESKFQDAYNRRPERPQYRSNMYRSTTSEQAPSRQLQLT
PPEPPPSATSFSYTAPPPATPNFKSAFSPYQAPLPPAFPPSEPPFHHPAQREGEYLRPPQ
PPLAPPTDFLPSKDRPETPPIPEPPPEPLPHPSTPPPQTPEGCPSPGSPALDSERNSLDS
RIEMLLKEKRTKLLPFLEERDSDNEVRMEGSPISSSSSQLSPIPPYTSSSQGGQQNSRPP
STGLEDISPTPLPDSDDEDPVPGTASLNRRVGSPAHEKSKSDLKDGPFGGQAPPDKTDPG
PQSSGEDMEISDDEMPGAPITSGDCGIVNADMSPMQTMSMHPAGYHHLQAGFAMSHHHLG
PHAAMSGHPAHLGGHPGVPPHMLAPMSPYAPSMIQLMGLMNCVPWERWSTVPMSFQMQQQ
MLSRMAQTRGPYSYPHFMDGCASGLFGGHYQPLSMDATPACSTGASGHEWSHPSLPKFNP
TVPPPGYDTKKEDPHKATVDGVLLVIVKELKAIMKRDLNRKMVEVVAFRAFDEWWEKKEH
SAKASLTPVKGAEGKEEEKPKPKETLASSLLENWNKGEGLGFEGMGLGIGLRGAIRLPSF
KVKRKDPPEAAAAGDNKRARPSTPVDDELEDEDRDRDPAELGSGDSKTDGDSASAKRRHS
RPLELDSEGEEEMDTSEKEEEESDVEEDEPDEKKDIDRLSSVKESDNEERDDEEDKGSTS
DSASSDSSDDEADSSASSKASSDSSAESSDSSVESSDSEYELSSEEEDEEEEETAADDEM
DGKEAATSSSSSSSSSSSDEADKEVNSKPPSPPSVAVRELKEERGDEEVLSLKSKHRPPS
PEENRKPPSPKGVPVKEETIRVDGNISVVKLEPKEYVTNLRPPTPTGALPDSDQETKTKG
KAEPEESPCTPVGLVPSHPNAPASKSISASLMHLPLPPHPAVEGRSLLHPPPSPLPDFPQ
RPRLPTVEDIPRTPGRDLMERARSLGKSQSTDTVPNTPGSDAPLTGSSLLLSSPHIPGSP
FSYPSQSPVLSAGVPRTPGRDLTFTPVFPDPAALSLNRKSLDEGAVFKEPPVTALPNQVL
SAATEDSATIPEDLPAKLAADVPGLLDTTPSKKKPGRPKKAPAISSADDSLEFSSESMDL
PRESLFGALSLQMTSVKSPKHSSLDFREGEDEPQTTLLPPADGFISYKKEASALSKPARR
SRRGWEELLLDSLSPVTTPPRAYFSPRSEFEEMTILYDIWNEGIDEEDIRLLQITYDKML
QQDIGNDWLNDTLWVNHPPTNIPGVKKKKKEDGMRDHMTGCARSEGYYKIDKKDKVKYLQ
SSRLQSEEPPVDTQGMSIPAQVHASTRAGSERRSEQRRLLSSFACDSDLLKFNQLKFRKK
KIRFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIADMREKRYEEEGIGSSYMFRVD
HDTIIDATKCGNFARFINHSCNPNCYAKVITVEAQKKIVIYSRQPINVNEEITYDYKFPI
EDEKIPCLCGAENCRGTLN
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccgggggagaggaacagattgaacgaagaccatggcagaaagcagagttca
agtctggcgaacggcatggacggtcatcccgtctgcagctcggcggagaagcggagtcac
cactggagaagttacaagttgatcatcgacccggcgctgaagaagggatcgcacaaactg
tatcgctacgatgggcagactttcagcatgccaaaccccgggataccaccagtggacgtc
gtccgagatccgagaatcggtcgtctctggaccaagtacaaagagacagacctgcctgtg
cctaaatttaagattgacgagtgctacgtggggcccgtgcccccgaaggaggtgacgttc
gcccggctgaacgacaacatcagggaaggctttctcatggacatgtgcaaaaagttcggc
gacatcgaggaggtagagatcctgtacaaccccaagaacaagaagcacctggggattgcc
aaagtcgtcttcgagaacgtcaaggccgccaaggtggccgtccagtcgctgcacaacacg
tctgtgatgggaaacatcatccacgtggagctggacccgaaaggtgagaatcgcctcagg
tacttccagctcctgatgaacggcagctacaccccacggacgctgccggtcggtggagag
gagacccgagaggtttcccctctgagcctggcagaggcattactggcctgcgagcccatc
cgcaggttgtccgagagcaacatatcgtctgtggccggagctctgccgcccagcagctcc
accactcccctcagcctggagacgggttactccagcctgaagcaggacacgccgcagtcc
cagggaaccccgcggcagccgggcacgcccttctctcaggactccagttattccagccgg
cagtccacgccggcgtaccagtcgagccgtcccgagagctccggaggctacaagtctcgt
cggcatgagagtaagttccaggacgcgtacaaccgcagaccagagaggcctcagtatcgg
agcaacatgtaccgaagcacgacgtcggaacaggctccctcgcgacagctccagctcacg
ccacccgaacctccgccttccgccacttccttcagctacacggcgcctcctcctgccacg
ccaaacttcaagtccgccttctcgccctaccaggctcctttgccgcccgcctttcctcca
tccgagccccctttccatcacccggcccaaagggagggcgagtacctccgaccaccgcag
ccgccgctggcccctcccacggactttttgcccagcaaggaccgaccggaaacgcctccg
atcccagagccgccgccggaaccccttccccatccgagtacccctcctcctcagacgccg
gagggctgcccctcgccgggctccccggcgctggattcggagcgcaacagcctggattca
cgcatcgagatgctcctcaaggagaaaaggacaaaactgctgccgttcctggaagagcgg
gactcggacaacgaggtgcgaatggagggaagtcccatttcctcctcgtcctctcaactg
tccccaatcccgccttacacgagtagctcgcagggcggccagcagaattcccgtccccct
agcacgggcttggaggacatcagcccgaccccactgccagactcggacgacgaagacccg
gttcctggaaccgcctcgctgaacagaagagtcggttctcccgcccacgaaaaaagcaaa
agtgacctcaaagacggcccttttggaggccaggctcccccagataaaacggacccgggc
cctcagtcgtcaggagaagacatggaaatctcggacgacgagatgcccggagctccgatc
accagtggagactgtggcatcgtaaacgccgacatgtcccccatgcagaccatgtccatg
catcccgccggctaccaccacctgcaggccggcttcgccatgtcccaccaccacctgggc
cctcacgccgccatgtcgggacatcccgcccacctgggcggtcaccccggggtccccccc
catatgctggcccccatgagtccctacgccccgagcatgatccagctgatggggctgatg
aactgcgtgccgtgggaacggtggagcacggtccccatgtccttccagatgcagcagcag
atgctgagccgcatggctcagaccagagggccctactcgtatccccatttcatggacggc
tgcgcgtccgggctgttcgggggacactaccagcctctgtctatggacgctacacccgct
tgcagcacaggagcgtccgggcatgagtggagccatcccagtttgccaaagttcaacccc
accgttcctcctccgggatatgatactaagaaagaggatccccacaaggccacggtggac
ggcgtgctgctggtcatcgtcaaggagctgaaggccatcatgaagagggacctcaatcgc
aaaatggtggaggtggtggctttcagggctttcgatgagtggtgggaaaagaaggaacat
tcggcaaaggcatccttgactccagtgaagggcgctgagggaaaagaagaagaaaagccc
aaacctaaggagacgctggcctccagtctgctcgagaactggaataagggcgaggggctc
ggctttgaaggaatgggtctagggattggtttgcgaggagccatccggctgccctccttt
aaggtgaaaaggaaagacccgcccgaggccgcggcagccggcgacaataagcgagcccgg
ccgtccaccccggtggatgacgagctggaggatgaagaccgggaccgagacccagctgag
ctcggctcgggcgattccaaaacggacggcgacagcgcgtcggcaaagaggcggcactcg
cgaccgcttgagctggacagcgagggagaggaggagatggacacctcggagaaggaggag
gaagagtctgacgtggaggaagacgagcctgatgaaaagaaggacattgacaggctgtcg
tccgtcaaggaaagcgacaacgaggagcgggatgatgaagaggacaaaggctcaactagc
gacagtgcatcctctgattcatctgatgatgaagccgacagctctgcctcctccaaggcc
agctccgactcgtcggcggagagctccgactcctcggtggaaagctccgactcggagtac
gagctgagctccgaggaggaagacgaggaagaggaagagacggcggcggatgatgagatg
gacggcaaagaagcggcgacctcttcgtcctcctcttcctcgtcgtcgtcctccgacgag
gcggacaaggaggtgaacagtaaaccaccgagtcctccctcagtggcagtcagggagctg
aaggaggagcgcggggatgaggaggtgctaagtctcaaatctaaacacagacctcccagt
cctgaggagaaccggaagccgccgtctcctaaaggtgttccagttaaagaggaaacgatt
cgggttgatggaaacatcagtgtcgttaagcttgaacctaaggagtacgtgacaaacctc
cggccccccactcccacaggggccctgcccgacagcgaccaggagacaaaaaccaaaggt
aaagcggagcccgaagaatccccctgcacccccgtgggattagtcccatcccatccaaat
gcaccggcctctaagtccatctctgcctccctaatgcaccttcccctccctcctcaccct
gccgtagaaggtcggtccctcctccaccctccccccagcccgctccccgacttcccccag
cggcccaggctccccacggtcgaggacatccctcggacgccgggcagggacctgatggag
cgcgcccggagcctgggcaagtctcagagcaccgacactgtgcccaacacgcccggcagc
gacgcgcctctgacgggcagcagcctgttgctcagctcccctcacatccctggtagcccc
ttctcctacccctcgcagtcccccgtcctcagcgcaggagtccctcgtacgccaggaaga
gacttaacgttcacccctgtcttccctgaccccgcagcactttcgctaaataggaagagc
ctcgacgaaggagccgtttttaaggagccaccggtcactgctctgcctaaccaggtcctg
tcggctgccacagaggactccgccaccatacctgaagatctccctgcgaaactcgctgcc
gacgttccggggctgttggacaccacgccatcgaagaagaagcccggacgacccaaaaag
gccccagctatctcttcagccgacgactctttggagttctcatcggagtccatggatctg
cctcgggagtccctctttggagctctgtccctccagatgacgtcggtcaagtcgcccaag
cactccagcctggacttccgggaaggagaggacgagcctcagacgacgctcctgcctccc
gctgacggcttcatctcctacaaaaaggaggcgtcggcgctttcgaagcccgctcggagg
tcgaggcgcggctgggaggagctgctcctggacagcctgtcccccgtcaccacccccccc
cgggcgtatttcagcccgcgctccgagttcgaggagatgaccatcctgtacgacatctgg
aacgaaggcatagacgaggaggacatccgacttctgcagatcacgtacgacaagatgctg
cagcaggacatcggcaacgactggctcaatgacacgctctgggtcaaccatcctccgacc
aacatcccgggggtgaagaaaaagaagaaagaagacggcatgagggatcacatgacgggc
tgcgctcgaagcgaggggtactacaaaatcgacaagaaggacaaagtgaagtacctgcag
agctcccggctgcagtcagaggagccgccggtcgacacacagggtatgagcattcccgcg
caggtccacgcctcgaccagagccggctcggagcggcgatcggagcagcggcgcctgctg
tcctcgttcgcctgcgacagcgacctgctcaagttcaaccagctgaagttccgtaagaaa
aagatcagattctgcaaatcgcacatccacgactggggtctttttgccatggagcccatt
gctgctgatgaaatggtgatcgagtacgtgggccagaacatcagacaggtgatcgcggac
atgcgggagaagcgctacgaggaggagggcatcggcagcagctacatgttccgagtggac
cacgacaccatcatcgacgccaccaagtgcggcaacttcgcccgtttcatcaaccacagc
tgcaacccgaactgctacgccaaggtcatcacggtggaggcgcagaagaagatcgtcatc
tactccaggcagccgatcaacgtcaacgaggagatcacgtacgactacaagttccccatc
gaggacgagaagatcccgtgtttgtgcggcgcggagaactgcaggggcacgctcaattaa
DBGET
integrated database retrieval system
