Kryptolebias marmoratus (mangrove rivulus): 108234092
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Entry
108234092 CDS
T05608
Symbol
tarbp1
Name
(RefSeq) probable methyltransferase TARBP1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108234092 (tarbp1)
03036 Chromosome and associated proteins [BR:
kmr03036
]
108234092 (tarbp1)
Enzymes [BR:
kmr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
108234092 (tarbp1)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108234092 (tarbp1)
Chromosome and associated proteins [BR:
kmr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
108234092 (tarbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
Motif
Other DBs
NCBI-GeneID:
108234092
NCBI-ProteinID:
XP_017268494
LinkDB
All DBs
Position
LG22:23187830..23200346
Genome browser
AA seq
1608 aa
AA seq
DB search
MSSVLINAILSSSPDYNLLFESLCWPGETCWPETERLEALTALVEGLGPLLLSDSGSAPL
TDATKRNIREKIESVIWKKCLPFLSRISAEADDGARCRESTAAACRLLGACVAPCGGNVQ
RRVILSVLPSFQPSEDESAQGHLSEQVATEVVAALMPFLTADEQLTSSTLECALASIRSL
PDAQLVSRIAVRIVLTLLNYSSGGSGRVLDAVCGWHASERGPVATERALLCLTVLADHLL
KPRGCLDPRLSLWFWRLVQDGLTNRDGVSRKRALYLLKRCAALSEEEGLDCPHPASEEEE
VLFRWAPDKSRLLREFWEDYVLVMETLEENQVHVVRPVLNRIDTLIQTTVNDSQASERGL
LHPSWLLCVYQRMFHSENKSLMREGVCHLLELQVLQQPHFASAFSQFVVGPFMDALSEMS
LFCRSAGQSVGDCPELAVKLQVFMSTFFSSLPSEERGHVLLQLIQQLGSKHWCAVPLLFV
CQALSKLPPGPLLRASGLAALREVLRCTMITHQVLLRGAAQCFLLNSALSLTAVSDVTLD
DVFSLLTHFRADESLCRGTELWSQLCVWFLEHENSFKSRTSEDCNDAATRKETIRAYVQS
ELLSYLQVPASTGRPERLPDCREADKLARAILLCVDMERIRLGAESLLSPLLSPLLDTLS
RISTNIYLPVRKSDKSLQLLLRLLQLGAEPRCQRAGGEEGDDVMFALEKLLFKHVDPIQE
FILRRLCGELQELVDVERAELYLCVLRQLVLMCGCKIQPCCFPKLIKYSLAVLQQPAQQI
PSVTSQVTRAVSMASLAAVCGLMEQEGIGIESEVLSALKPLNHYFYTSTTSSQCQSSLGS
INECLMKPQLIGCSGDLETQGFLQQDWGRIAANFMRDQWVCLNFLVKAVGLPESAEFSQT
PEFLRAALSCSIEALSLLPSDLVLPVLHFLKTAMEQLAHSEEALCVQAVTLSWELVQALS
TNAHDFWPALKGFISMAFQHKLLQLMHTTAPSLMAALKQVASELLELSQSKSGVFGVLLQ
HCCQTWLPKDGCGCEQADAQFSSVFSHIDIVSEACVYGPVLRRDQRLVSDVQIYVEQLGE
KCAANVAVSSDNRDDQLARTCVLTLLSCLDSSQQQHQRLLQELVMQLLKTDNTISKSKVR
YHSNSLQHRVKNRVWQTLLLLLPKLGEEFVSSLLNHVFEAGFCSNQPSVKYLIEWMMILI
LVQNPQHIDRFWTCFNLDHEQTKTSVCTFLSVLVHFSVIVAQVKEKAVQLRKALDVILQS
CFSHNFSVRLYALLALKKVWSLAEEEEEEEADAFRGMSSVVRACLNQAEAMQSSGNANKN
WIRIQGHFFFGAFHPVRDYSVETIFYTFPSLSELADDEWIPPWKFEKLSQFPESSSCPLR
NASPDLGQLHPGDWIQQDRSEQDKEERWAEVQKKITPWRLGIQDQEPELQLVPAQRAARL
GKQQGALLVVASLIDKPTNLGGLCRTCEIFGASALVLDSLHHINDKHFQSLSVSSELWLP
LLEVKPVELSDFLQVKKSEGYCIVGVEQTANSHSLQDYHFSEKTLLLLGNEREGIPANLL
QMLDVCVEIPQQGVIRSLNVHVSAALLVWEYTRQHLSPASSETVSERT
NT seq
4827 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgttttaataaacgcgatcctaagcagctctcctgactacaacctgttgttt
gaatctctttgttggccgggagagacctgttggcccgagacggagcggctggaggcgctg
acggctctcgttgagggtctcggacctctccttctgtccgactccggctcagctccgctt
acggatgcgacgaaacgcaacatccgcgaaaagatcgagtcggtcatttggaagaagtgt
ctgccctttttgtccaggatatcagcagaggcagacgacggtgcgcgctgcagggagagc
acagcggccgcctgcaggctcctcggcgcctgcgtcgctccgtgcggcggaaatgtgcag
aggcgagttatcctctccgtcctgccgtccttccagccgtcagaggatgagtcggctcag
ggacatctcagtgagcaggtcgccactgaggttgtagcagctctcatgcctttcctcaca
gcggatgagcagctgacgtccagcaccttggagtgcgccctggcctccatcagatcgctc
cccgacgcgcagctggtctccaggatcgcagttcggattgttttaaccctgctgaactac
agcagcggcgggtccggcagggtcctggatgctgtgtgcggctggcacgcgtccgagcgc
ggccccgtggccacggagcgggcgctgctgtgtctcaccgtcctggcagaccacctcctg
aagccccgcggctgcctggacccccgcctgtccctgtggttctggaggctcgtgcaggac
gggctgaccaacagagacggcgtgtcacgcaagagggctctttacctgctgaagaggtgt
gcggctctgtctgaggaggagggtttggactgtcctcaccctgcatcagaggaagaggag
gtgttgttcagatgggcccctgacaagagcaggctgctgagagagttctgggaggattat
gttttggtgatggagactctggaggaaaaccaggtccatgttgtccggccagttttgaac
agaatagacacactgatccaaacaacagtgaatgacagtcaagcttcagagcggggcctc
ctccacccgtcctggctgctgtgtgtgtatcagcgcatgttccacagtgagaataaatcc
ttaatgagagaaggagtgtgccatctgctcgagctgcaggtcctccagcagccccacttt
gcctcggcgttttctcagtttgtcgtcggccctttcatggatgcactttctgaaatgtcg
ctcttctgcaggtcagctggtcagagtgtgggagactgtcctgagctggctgtaaaactc
caggtcttcatgtccaccttcttcagcagcctgccgtcagaagagagaggtcatgtgttg
cttcagctgattcagcagctgggctctaagcactggtgcgctgtacccctcctcttcgtc
tgtcaggccctgtccaagctgcccccggggcctctgctgagggccagcgggctcgctgcc
ctcagggaggtgctgcggtgcaccatgatcactcatcaggtcctgctgagaggggctgct
cagtgctttttactaaacagcgccctctctctcacagcggtgagtgacgtgaccctagat
gacgtgttcagtctgctgacacacttccgtgctgatgaatcgttgtgtagagggacagag
ctctggagtcagctgtgtgtctggtttttggaacatgaaaacagttttaagtccagaaca
tcagaggattgtaatgatgctgccacaagaaaagaaaccatcagagcttatgttcaaagt
gaattactctcctatcttcaggttccagcaagcacaggtcggcctgagaggttacctgac
tgtagagaggccgataagctggccagagccattctgctgtgtgtggacatggagaggatc
cgcctgggagcagagtctctgctgtcccccctgctgtcccccctgctggacactctgagc
agaatcagcaccaacatctacctgcctgtacggaagagcgacaagagcctgcagcttctg
ctccggctgctgcagctcggagcagagccacgctgtcagcgagcgggaggcgaggaagga
gatgatgtgatgtttgccttagaaaagctgctttttaaacatgttgatccaatccaggag
ttcatcctgaggcggctgtgtggggagctacaggagctggttgatgtggagcgagcggag
ctgtatctgtgtgtcctgaggcagctggttctcatgtgcggctgtaaaattcagccttgt
tgtttccctaaactcatcaagtacagccttgcagtcttgcaacaaccagcccagcagatc
ccttctgtgaccagccaggtgacccgagctgttagtatggcatctctggctgctgtctgt
gggctgatggagcaggaagggattggcatcgaatcagaggttctttccgctctgaaacct
ctgaatcattacttctacacttcgacaacttcctctcagtgtcagtcatctctgggaagc
atcaatgaatgcctgatgaaaccacagctgattggctgctcaggtgatctcgaaacacaa
ggttttctgcagcaggactggggacgcatcgctgccaacttcatgcgggaccagtgggtt
tgtctgaacttcctggttaaagctgtaggccttcctgagtctgcagagttttcccaaaca
cccgagtttctcagagccgctctgagttgcagcatcgaggccctttccctgctgcccagt
gacctggtgctgcccgtgctccactttctgaagaccgccatggaacagttggctcacagc
gaggaggccctctgcgtgcaggcggtgactctgagctgggagctcgtacaggcgctcagc
accaacgcccatgacttctggcctgcattaaaaggtttcatctccatggcctttcagcac
aaactcctccagctgatgcacactacggctccaagcctcatggccgctctgaaacaggtt
gcctcagagctgctggagctgtctcagtcaaaaagcggagtgttcggcgtgctgcttcaa
cactgctgtcagacatggctgcccaaagacggctgcggctgtgagcaggcagacgctcag
ttttctagtgtcttcagccacatcgacatcgtctctgaggcctgtgtttacggacccgtc
ctcaggagagatcagcgactcgtttctgacgtccaaatatatgtggagcaacttggtgaa
aagtgtgcagctaacgtcgcagtttccagcgacaacagagacgatcagctggcccgcaca
tgtgtgctgactcttctgagctgcctggattcatctcagcagcagcaccaacgactccta
caggagctggttatgcagctgctgaaaacagataacaccatatcaaagtctaaagtacgt
taccatagtaactccctgcagcatcgggtcaaaaaccgagtgtggcaaacgctgctgctg
ttgctgcccaaactcggagaggagtttgtttcctctctgctgaaccacgtgtttgaagct
gggttctgcagtaaccagccctcagtcaaatacttgatagaatggatgatgattctaatc
cttgtccagaatccgcaacacatcgacaggttttggacctgcttcaatctggatcacgaa
cagaccaagacgagtgtctgcaccttcctgtcagttctggtacatttcagtgtcattgtt
gcacaagttaaggagaaggcggtgcagctgcgtaaagcgctggacgtcatcctgcagtcg
tgtttcagtcataacttcagcgtgcgcctgtacgccttactggctctgaagaaggtgtgg
agcctggctgaggaagaggaggaggaggaggctgatgctttcagagggatgtcctctgtg
gtcagagcttgtctgaatcaggctgaggccatgcagagctccggaaatgccaacaagaac
tggattaggatccaggggcacttcttctttggtgcctttcatcctgtcagggattatagt
gttgagacgatattctacacttttcccagtctgtcagagttggctgatgatgagtggatt
ccaccatggaagtttgagaagctgtctcagtttcctgagagttcatcgtgtcctttgaga
aatgcttctcccgacttgggccagctccatcctggagactggatccagcaggacagaagt
gagcaggacaaggaggagcgctgggccgaggtgcagaagaagatcacaccctggaggtta
ggcatccaggaccaggaaccagaacttcagctggttccagctcagagagcggctcggctc
ggcaaacagcagggcgccctgctggttgttgcttcgctcatcgacaagcccaccaatttg
ggaggtctttgcaggacgtgtgagatatttggcgccagcgctctggttctggatagcctc
catcatatcaatgacaaacactttcagtccctgagcgtctcgtcggagctctggcttcct
ttgttagaggtgaagcctgtggagctctctgatttcttgcaggtgaagaagagtgaaggt
tactgtattgttggagtggagcagactgccaacagtcacagcctccaggattatcacttc
tctgagaaaacgctgctacttctgggcaatgaacgagaaggcattcctgcaaatctgctc
cagatgttggatgtgtgcgtggagatccctcaacaaggggtcatccgctcgctcaacgtg
cacgtgagcgctgctctgttggtttgggagtacacccggcagcatctcagccctgcttca
tctgaaacagtctctgaacgcacatga
DBGET
integrated database retrieval system
