Kryptolebias marmoratus (mangrove rivulus): 108234666
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Entry
108234666 CDS
T05608
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kmr03016
]
108234666 (trdmt1)
Enzymes [BR:
kmr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
108234666 (trdmt1)
Transfer RNA biogenesis [BR:
kmr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108234666 (trdmt1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
MTS
Motif
Other DBs
NCBI-GeneID:
108234666
NCBI-ProteinID:
XP_017269525
UniProt:
A0A3Q3BI24
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Position
LG21:complement(7661082..7676872)
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AA seq
414 aa
AA seq
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MCTTMGDLRVLELYSGVGGMHFALKESDVPAQVVAAIDINTTANQIYKHNFPDTPVWNKT
IEGITLDDFNKLSVDMIMMSPPCQPFTRLGLQGDVADPRTKSFLYILDLLPRLHKLPRFI
LLENVKGFESSSARDRLVQTLMDCGYSFQEFMVSPTSVGIPNSRLRYFLLAKISAESSSF
RAKSKVSSAATCPAKSDVPSDLSPTCPSPGQPVDKTPGGHLFKLETAVEVQRKISQNHDL
SVRQIQDFLEPLTEENMQHHLLAPKTLLRYGLILDIVQPKCRRSVCFTKGYGRYVEGTGS
VLQCCTETEIESVFTGLDRLSEKDKLEQLLKLKLRYFTPREVANLMGFPPRFSFPKNIST
IQQYKVLGNSLNVVVVARLLQLLLSERFGRSEGGEQLSVSEDPLSGCRLPTACC
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaccaccatgggggatctgagggtcctagaactgtacagcggggtaggagggatg
cattttgccttaaaggaaagtgatgtacctgcccaggtagtggccgccatcgacataaat
accacagccaatcaaatctacaagcacaatttcccagacacccctgtatggaacaagacc
attgagggcataacattagatgacttcaataagttatctgttgatatgataatgatgagc
cctccttgccagccttttaccaggttggggcttcagggtgacgtcgctgacccccggacc
aagagcttcctctacatcctggatcttctaccgaggcttcacaaactgccccgcttcatc
ctgctggagaatgtgaaaggatttgagagttcctctgccagggaccgtttggtacaaaca
ctgatggattgtggctacagtttccaggagttcatggtctcaccaacaagtgttgggatt
ccaaattcaaggctgcgttatttcctgctggctaagatttcagccgaaagctcaagcttt
cgggcgaaatcaaaggtttccagtgctgccacatgtcctgctaagagtgatgtcccctca
gacttgagtcccacctgtccaagtcctggacagccagttgacaaaacgcccggtggtcac
ttgtttaaacttgagacagcagtggaagttcagaggaagatatctcagaaccatgacctg
tctgtcagacaaatacaagactttctggaacccctgacagaagaaaacatgcagcaccat
ctccttgctcctaaaacactgttgcgatatggtcttattttggacattgtccagcccaaa
tgcaggagatctgtctgctttaccaaaggctatggaaggtatgtggaaggaactggctct
gtgctgcagtgctgcacggaaactgagattgagagtgtgtttacaggtctggaccggttg
tcagaaaaggacaaacttgaacagctgttgaaattaaagctccggtattttacccccagg
gaagtagccaacctcatgggcttccctccgcgtttctcttttccaaagaacatctcaaca
attcagcagtacaaagttttaggaaacagccttaatgttgttgtggtggcccgacttctc
cagctgctgctctctgaacgttttggacgttctgaaggaggagaacaattatctgtttct
gaagatcctctcagcgggtgccgtctgcccacagcctgttgttga
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