Kryptolebias marmoratus (mangrove rivulus): 108242978
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Entry
108242978 CDS
T05608
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04010
MAPK signaling pathway
kmr04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108242978 (cacna1ha)
04020 Calcium signaling pathway
108242978 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108242978 (cacna1ha)
Ion channels [BR:
kmr04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108242978 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
108242978
NCBI-ProteinID:
XP_017283631
LinkDB
All DBs
Position
LG12:14379163..14442699
Genome browser
AA seq
2364 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVTCLSEWCRILQVLDDCIFAFFAVEMVIKMVALGIFGSNCY
LGDKWNQLDFVIVMAGVMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLREDIKTIYNLSINPYYMSEEGEDS
PFICSALRENGMLRCHSVPPYSEGGVECSLAASLQSSALIGLPPGVGGASFNGCINWNQY
YNDCRPGELNPHKGAVNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLI
IVGSFFMINLCLVVIATQFSETKQRENALMREQRARFMSNDSTLASYSEPGSCYEEMLRY
ISHLYRKFRRRLQRMYYGWHSKRRKKVNPNGSGCGGNGSGNGHGQGSSRGSGPGTAMWLR
PIHNLLQNHQHQHCRLSNGGQHTVSVASAEHTDKEGAGEELEMKVRGGSTNENDGDNPAV
VTQGVGTLLGRLNGGMNYPTILPSFVCSYSSKTPPSHSKQSGRSPEQHQSPSEHTETLTK
LYQLMGQHSCQGLLFQLAGVLPSPLLLELLSCPLCARSLETLELELGDLEGGKGEADGLH
DFPQGGDLRGCRSRFRRRRVVEYRNGAFRAWTHFREKLRRIVESKYFNRGIMIAILVNTL
SMGIEYHEQPEELTDVLEISNIVFTSMFVLEMGFMLLAFGFFGYIRNPYNIFDSIIVIIS
VWEIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFT
FSILGMHLFGCKFGLRTENGDTIPDRKNFDTLLWAIVTVFQILTQEDWNVVLYNGMASTS
PWASLYFVALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSNNFDEDEKVEQFR
DTELKMYSLMLTANGHIDPRGTVAPPIIMRTAATPMPTPKSSLGPESILEEELLYREGIS
QHGEVGLGFSEAGVDHVGSRRGSSASMDPSAYDQRSLSLSSPGRRSPLPLRGSGSSWGSR
RSSWNSLGRAPSLKRRDTSGERESLLSGEGGEEEVDGQDENGEGGGNNRLKPGPMELQLP
SPLCPSIIAEYGDCNGRTLTYDPNVNSDLKDDFSAEDDLDDDSPFCYWVRREIHNIKPRW
CKEHETWTLYLFSPENSVRMWCQSVISHKLFDHVVLVFIFLNCITIALERPDIQLHSKER
VFLSVSNYIFTVIFLAEMAIKVVALGFCFGKQSYLQSSWNILDGVLVFVSLVDILVSLAY
TSGNRILGILRVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFG
ILGVQLFKGKFYHCEGLDTKNITNKSDCLMANYRWIRRKYNFDNLIQALMSLFVLSCKDG
WVNIMYDGLDAVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQ
EEEEARLREEKRLKMIDKKRRSKENGGAEAKQRPYYADYSPVRLSIHSLCTSHYLDLFIT
FIICINVFTMSIEHYNQPQYLEEVLKYCNYVFTFIFVIEALLKLVAFGFQRFFKDRWNQL
DVAIVALSIMGITLEELKMKAALPINPTIIRIMRVLRIARVLKLLKMAKGMRALLDTVMQ
ALPQVGNLGLLFMLLFFIYAALGVELFGKLECNENNPCEGLSRHATFENFGMAFLTLFRV
STGDNWNGIMKDTLRECQPDDRHCISYLPWISPIYFVTFVLMAQFVLVNVVVAVLMKHLE
ESNKEAKEDAEMDAEIALEMEEERQRRQSTASNNSSAGGTYIGPCPNSPGEEEEEQCDDP
DLLSTQKMSVSRMHSLPNDSYMFQPVRPASAPYPMKEVDVSSQHQHSVSVMSVHSQPCES
RSLLQVPNVSPHHPQSTPTLTLPRIAPPTPCPSPRAMHRQVAIKVDSVESQSNEKQERPN
SAHLPPQSPSPHSTYTPSFSPVTSQSSSPSVLSLPPRSLSSSPLSPSPSSPSPLPLLPST
PSLLLPPPPSPRLPSRSGSLRRPRAPSAVSLVDPADEEVYHITTLARSRWKDEEGGEQES
RRKTSRSHSLSPYTLPCRLDFSFSSLSPPSVLPPSSARSAQSLLEAGLKDAKKGFSVDNH
DFLDKLSPESAGYSEDQRRHSIEVCLPQTLITSDSQHLTTENHQSGKSAQALPVRVQSVR
SSHRKKKTSPPCISIHPPSEKEHPRLPSPPKLADCSMMLRHRTPSIDLTPPSNTFTKDTS
TDIRTQMQTPLTPIHVPLQALSPTHTLTPTPTHTQTHTPLVASTQSLPSIPISPNVFIQP
HAPLLPTVMHFSQSHPLSSAARHAPLAGDCVPLPRFTFDQPQSRYVSGLSAAISDPDPAT
CSSPFDSRLGSSAGFSAKNRRTAQ
NT seq
7095 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgatcctgctcaactgtgtgactttggggatgtttcagccctgcgaggatgtt
acctgcctgtcagagtggtgccgcatcctacaggtgttggatgactgcatctttgctttc
ttcgccgtggaaatggtcatcaagatggtggctcttggaatttttggctccaattgttac
ctcggtgataaatggaaccagcttgactttgtcattgtcatggcaggagtgatggagtat
tctctggatggccacaatgccagcctgtcagccatccgtaccgttcgagtacttcgaccg
ctgcgggccatcaacagagtaccaagtatgaggatcctggtgacgctgctcctcgacacg
ttacccatgctgggcaatgttctcctcctttgcttctttgtctttttcatttttggcatc
gtgggggtccagctgtgggcgggactactgcgcaaccgctgcttcctgcgagaggacata
aaaacaatttacaacctgtcaataaacccttactacatgtcggaggaaggcgaggacagc
ccgtttatctgctcggcgctccgtgagaatgggatgctgcgctgccacagtgtgccaccc
tactctgagggcggggtggagtgctcattggctgcttccctccaaagttctgctctgatt
ggattgccccctggagtgggaggggccagctttaacggctgcatcaactggaaccagtac
tacaacgactgccgccccggggagctcaacccccacaagggagccgtcaactttgacaac
attggctatgcttggatagccatattccaggtcatcactctggaaggatgggtggacatt
atgtactatgtcatggatgctcattccttctacaattttatatattttatactgctcatt
attgtgggctctttcttcatgatcaacttgtgcctcgtggtcatcgccacccagttctcg
gagacaaagcaaagggagaacgccctgatgagggagcagcgcgcccgcttcatgtccaac
gactcaaccctggccagctacagtgagcccggctcgtgctacgaggagatgctgcgatac
attagtcacctttaccgcaaatttagacgcagactgcagaggatgtactacgggtggcac
agcaaacggcgtaaaaaggtgaacccaaacggcagcgggtgtggcggcaacggcagcggt
aatggtcacggccagggttccagcaggggctccggtccgggcactgcaatgtggctgagg
ccgattcacaacctcctgcagaatcatcagcatcaacactgtcgcctcagcaatggtggg
cagcacacggtcagcgtggcatccgcagagcacacggacaaagagggcgcaggggaggag
ctggagatgaaggtccggggaggaagtacaaacgaaaatgacggcgacaacccggccgtc
gtcactcagggagtggggacattgctcgggcgactgaacggggggatgaactatccgact
attctgccgtcctttgtgtgcagctacagcagtaagacgccgccgtcacactcaaagcag
agcgggcgcagtccagagcagcatcagtccccgtctgaacacacagagacgctgaccaag
ctttaccaactcatgggacagcacagttgccaggggctcctgttccagctggcaggcgtg
ctgcccagtcctctgcttttggagctgctcagctgtcctctgtgcgcccgaagccttgag
accttggaactggaactaggagacctggagggaggaaagggcgaggctgacggactacat
gacttcccccaggggggtgatctaagaggatgcagaagccggttccgacggcgaagggtt
gtggagtacaggaacggagcctttcgggcctggacacattttagggaaaaactgaggcgg
atagttgaaagtaaatacttcaaccgagggattatgattgccatccttgtcaacacactc
agcatggggatagagtaccacgaacagcccgaggagctgacggatgtgttagagattagt
aacattgttttcaccagtatgtttgttctggagatgggcttcatgctgctggcttttggc
ttttttggatacatcagaaacccatataacatcttcgacagcatcatcgtcatcataagt
gtgtgggagataattggtcaagcggatggtgggctgtcagtcctgcggacgtttcgtctg
ttgcgggtgctgaagcttgtgcgcttcctgcctgccctgaggagacagctggtggtgctg
atgaagaccatggacaacgtggccaccttctgcatgctgctgatgctttttatctttact
tttagtatactgggcatgcatctttttggatgtaaattcggtctacgaacggagaatgga
gataccatccctgaccgcaaaaactttgatacactactctgggccattgtcactgtattc
cagattctgacccaggaggactggaacgtggtgctatacaacggcatggcttctacctct
ccatgggcatctctctactttgttgctctcatgacatttggcaattacgtgctcttcaat
ttattagttgccatcttggttgaaggcttccaggctgagggcgatgcgaatcggtcagag
tcagatgatgaaaagaagtccaacaattttgatgaggatgaaaaggtcgaacagttcaga
gacactgagctaaagatgtactctctcatgctgacggctaacggtcacattgacccccgt
ggcaccgtggctcctcccataatcatgcgcacggcagcgacacccatgcccacgcctaaa
agctctctaggacccgagtcgatcttagaggaggaactgttgtacagagaggggatatct
caacacggtgaggttggactgggtttctccgaggctggagttgatcatgtggggtctcgc
cgtggaagctcagcatccatggacccctcagcctatgaccagcgttctttaagtctctcg
agtcccggtcggcgttctcctctccccctccgtggctcaggcagctcgtgggggagccgc
cgctccagctggaacagcctgggaagagcacctagcctgaaaaggcgagacaccagtgga
gagagggaaagcctcttatcaggggaaggtggagaggaggaggtggacggccaggatgaa
aacggggaaggtgggggaaacaacagactaaagccggggcccatggagctgcagctgccg
tctcctctttgcccctccataatagcagagtacggtgactgcaatgggaggactctgaca
tatgacccaaatgtaaactctgacctcaaagatgacttctcagcagaggatgacttagat
gatgacagtcctttctgctactgggtccggagagaaatccacaacatcaagccccgctgg
tgtaaagaacatgaaacctggacgctctacttgttttctccagagaactcagtccgtatg
tggtgccaaagtgtgatctctcacaaactgttcgaccatgtggttctggttttcatcttc
ctcaactgcatcaccatcgctctggagaggcccgatattcagcttcacagcaaggagcga
gtgtttctgagtgtatccaactacattttcactgtgatcttcctagcagagatggccatt
aaggttgtagctcttggtttctgctttgggaagcagagctacctccagtccagttggaac
attttggacggagttttggtgtttgtgtctctggtggacatcctggtctctctggcctac
acgagtggaaacaggatcctggggattctccgagtccttcgccttctacgcacacttcgc
ccactcagggtgatcagccgagccccaggattaaagctggttgtggagacgctcatcacg
tctcttcgacctatcgggaacattgttttgatctgctgcgccttcttcattgtgtttgga
atcctgggggtccagctgttcaaagggaagttctaccactgtgaaggtctggacacaaaa
aacattacaaacaagtctgactgcctaatggccaactaccgctggatacggagaaagtac
aattttgacaacttgattcaggctctgatgtctctgttcgtgctgtcatgtaaggacggc
tgggtcaacatcatgtatgatggactggatgcagtgggagtggatcagcagcctgtgagg
aaccacaatccctggatgctgctctacttcatctccttcctgctcatcgtcagcttcttc
gtgctcaatatgtttgtcggcgtggtggtggagaacttccacaagtgccgacaggaccag
gaggaggaggaggcccgcctgcgggaggagaagaggctcaaaatgatagataaaaagcgc
aggagtaaggagaatggaggggctgaagccaagcagaggccatactatgcggactactct
cctgtgcgtctttccattcactcactgtgcacaagccactatctggacctcttcatcacc
ttcatcatttgcatcaacgtcttcacaatgagcattgagcactacaatcagccacagtat
ttggaggaggttctgaagtactgtaactacgtgttcaccttcatcttcgtcatcgaggcc
ctgctcaaacttgttgcatttggcttccaaaggttcttcaaagacaggtggaatcagcta
gatgtagctatcgttgcattgtccataatgggcatcactctagaggagctgaaaatgaaa
gcagcattgccaataaatcctaccatcatcagaatcatgagagtactcaggatagcaaga
gtgctgaaacttctgaagatggcaaaaggaatgagagctctgctggataccgtcatgcaa
gcgctgccgcaggtgggaaatctcggcctcctcttcatgctgctcttcttcatctatgct
gctctgggagtagagctttttggcaaactggagtgcaacgaaaacaatccctgtgaaggt
ctgagtcgtcatgcaacgtttgagaactttgggatggccttcctcacattgtttcgagta
tccactggagacaactggaatgggattatgaaagacaccttacgggagtgccaaccagat
gaccgccactgtatctcatacctgccttggatctctccaatctactttgtaacttttgtt
ctcatggcccagttcgttctggtcaatgttgtggtggcagttttgatgaaacatctggag
gagagcaacaaggaggctaaagaggatgcagagatggatgcagagattgcattagaaatg
gaagaggagaggcaacggagacaaagtactgcatccaacaacagctcagctggggggacc
tatattgggccatgtcccaattcacctggagaggaggaagaggagcagtgcgatgaccca
gacctgctgtccacacagaagatgtctgtatccaggatgcactctctgccaaatgacagc
tatatgtttcagcctgtacggcctgccagcgccccctaccctatgaaggaggtagatgtc
agttcccagcaccagcattcagtttcagtgatgtcggtccactcccagccctgcgagagc
cgctctctgctgcaggttccaaatgtttctcctcatcaccctcagtcgactcccaccctc
actcttccccgcatcgccccaccaacgccctgcccctcaccacgggccatgcacagacag
gtggcaattaaagtcgattcagtggagtcccaaagtaatgagaaacaagagaggccaaac
tctgctcatcttcccccacaatccccttctcctcactctacttacaccccatcattctca
cctgtgacctctcaatcttcctctccctcagtcctctccctcccaccccgctccctctct
tcctctcccctttcaccatcaccatcctccccatctccactccctctgctgccgtctacc
ccatcgcttctcctccctccacctccctccccgcgtcttccctcacgttctgggagcctt
cgacgaccaagggcgccatccgccgtctccctcgtcgacccagccgacgaagaggtgtat
cacattaccactttggctcgctccaggtggaaagatgaggagggaggggagcaggagagc
agacggaaaactagccgtagccactccctctctccttacacgctgccgtgtcgccttgac
ttcagtttcagctccttgtcacctccttcagtgttgccaccttcctccgcaaggagtgca
cagagtctacttgaggcaggtttgaaggatgccaagaaaggctttagtgttgacaaccac
gacttcctggacaaactgtcaccggaatctgccggttactctgaggaccagcgtcgccac
tccatcgaggtttgcctaccacagacgctgataacaagtgacagccaacacttaacaacg
gagaaccaccagtcaggaaaaagtgctcaggccttgcctgtgagggtgcagtcagtccgt
agcagccacaggaagaagaaaacgagccctccctgcatatccatccacccaccctcggag
aaggaacacccccgactcccatcacccccaaagctcgctgactgcagcatgatgctgaga
caccggacgccgtccattgacctgacgccgccatcaaacacattcacaaaagacacgtca
actgatatccgcacacagatgcaaacacctctgacgccgatccacgtacctctgcaagca
ctatcaccgactcatacgctgacacctactccaacacacactcagacgcacactccactg
gtcgcgtccacgcagagcctcccaagcatcccaatcagcccaaacgtgttcatccagccg
cacgcacctcttctccccaccgtaatgcacttctcacagtcacaccctctgtcttctgct
gcgaggcacgccccccttgcaggagactgcgtccccctcccccgattcacctttgaccaa
ccgcagtccaggtacgtgagcggcctgtcagcagccatttcggacccagatccggcaacc
tgctcttcccctttcgacagcagactgggaagcagtgcaggtttcagtgcgaagaatcgg
aggaccgctcagtaa
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integrated database retrieval system
