Kryptolebias marmoratus (mangrove rivulus): 108249855
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Entry
108249855 CDS
T05608
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
kmr
Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04020
Calcium signaling pathway
kmr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
kmr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108249855
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108249855
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
kmr04040
]
108249855
Ion channels [BR:
kmr04040
]
Ligand-gated channels
Glutamate (ionotropic)
108249855
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
NMDAR2_C
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
108249855
NCBI-ProteinID:
XP_017294981
UniProt:
A0A3Q3AJE8
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All DBs
Position
LG17:21877458..21943193
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AA seq
1388 aa
AA seq
DB search
MVTIRGHPHPSSWPPVVLLLLISSPLPLQARPLLIHSSINVAVVFSGSSYQNEVRGRLSG
ENFVDLPVVVSPVTVLVNDTNPRDLLTHLCDTMATEKLHGVVFEDDVGLGAGDQVAEVAQ
ILDFLSTQTALPIVGISGGSAVVIPYKAEGSSFLQMGASLEQQVICMFKILEEYDWGEFA
VVTSLMPGYDTFVDIVQSYTDTSYFLWNLQDIMTLEMSVGANDLKTKRVLQQLDSQVLLA
YCSHEEAQYLFRLAAEVGLLGPGYIWILPSLAVGNPNSLPPASFPVGVIGVITDQWRKSL
RQRVREGVAIIAKGAESFKKAYGFIPEGHGDCNKPAKQSDNNTLFRHMLNVTWERKDLSF
NNQGFLSNPSMVIIALDRERQWDKVGTFARGILQVRYPIWPRYGSFLEHVSDDRHLTVAT
LEEHPFVMVENVDPGTGTCVRNTVPCRRQSNHSDSPFGISESFTKLCCKGFCIDILKKLS
KTIKFSFDLYLVTNGKHGKLVHGIWNGMIGEVVYRRADMAIGSLTINEERSEIIDFSVPF
VETGISVMVARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEYFSPVGYNRSL
VSAKAPGGPTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVIFLASYTAN
LAAFMIQEQYIDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYPDMHTHMMKY
NQKGVEEALESLKNGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALEKD
SRWKRPIDLALLQFLGDGDTERLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAM
GLSLLVFAWEHLLYWKLRHSLHKSHKLDFLLAISRGIYSCFKGVEDPGRSSGLAKPDLTS
NYAQANMLKMLRTAKDLVSTANVESSLDNATKTIEHLSRHGGTLPVRVPQVSTEAVPGGF
AYVTENHCSLPQRSLTPPLSGVTSLKQQRGVTRPTPLRYTLPTRSSSCLYDRPLPVSSLS
TPHLAVGEPLPHQHPYHYQTTGRLYVDSHHHSPFIPYSDLQLPDIYASHPVSLSQNQHVQ
VGFSQPKRRSKSFQSDNGDIERRKHGEQGKNDKSPIGLSELKANHLHDNHVSTPSVDNIY
LGEGMCPRVENYGSWPPEDLVLRGRRRHRRPSFLKATWGSEQIRQLDESQSSLSSQSPST
LPDLFPCVVTPTTSAKPYNPAHLRNNLCLPRNQAYLHIREDQRRPNGRKGQRLRYSHSTH
LPTYGEAVRHGTGPGRGMVRRATSLLSRQYAHYLNSYPGLPLYHGPLDVQHHSQASSPVC
QLLACGSGRCGGQRALLYQDSLYGAYGFYQGSQTGSEAPVGQGVGSHPGGSPCVLRPWRR
VSSLESEV
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggtcaccatcaggggacaccctcacccctcgtcctggcctcctgttgtcctcctgctc
ctcatctcctccccgctgccgctgcaggcgaggccactgctcatccactcgtccattaac
gtggcggtggtgttcagcggctccagctaccagaacgaggtcagaggtcgcctcagcggg
gagaacttcgtggacctgcccgtggtggtgagccccgtgaccgtgctggtcaacgacacc
aacccccgagacctgctgacccacctctgtgacaccatggcaacggagaagctgcacggg
gtggtgtttgaggacgacgtgggcttgggcgcaggtgatcaggtggcagaagtggcacaa
atcctggattttctctccactcagacagctctgccgattgtgggcatcagcggcggctca
gcggttgttattccatataaggctgagggatcctcctttttgcagatgggagcttctctg
gagcagcaggtcatctgcatgttcaagatcttggaggagtatgactggggcgagtttgcg
gtggtcaccagcttgatgccaggctacgacacttttgtggatatcgttcagtcctacaca
gatacttcctacttcctgtggaacctgcaggatattatgaccctggaaatgtctgttggc
gccaatgacttgaagaccaaacgcgtgctgcagcagttggactcccaggtcttgttggcg
tactgctcccacgaggaggcgcagtacttgttccgcctcgcagccgaggtgggcctgctg
gggcccggctacatctggatcctcccaagtctggccgtgggcaaccccaacagccttcca
cctgcctccttccccgtaggtgtgatcggtgtgattacagaccagtggaggaaaagtttg
cggcagagagtgagggagggagtcgccatcatagccaaaggggcagagagcttcaaaaag
gcttatggtttcatccctgaaggacacggtgactgcaacaagccagctaaacagtcagac
aacaacactctgttcaggcacatgttgaatgtgacgtgggaaaggaaagatctgtcgttc
aacaaccaaggcttcttatccaacccctccatggtcatcatcgctttggatcgggagaga
cagtgggacaaggtgggaacgtttgctcgcggcatccttcaggttcgttaccccatctgg
ccgcggtacggcagcttcctggagcatgtatctgatgaccgtcacctgactgtggccacc
ctggaggagcatcccttcgtcatggtggagaacgtggacccgggaactggcacgtgtgtc
cgcaacactgtgccctgcaggcgtcagtccaatcattcagacagtcccttcggtatttca
gagtccttcactaaattgtgttgcaagggtttctgcattgatatcctcaagaaactgtcc
aaaaccatcaagttctccttcgacctttacctggtcaccaacgggaaacacggcaaactg
gtgcatgggatttggaacgggatgattggggaggttgtgtacaggcgtgctgacatggcc
attggctctctcaccatcaacgaggaacgctctgaaatcatcgacttctctgtgccgttt
gttgagacgggcatcagtgtcatggtggcacgcagcaacggcaccgtgtccccgtctgcc
tttcttgagccttacagtccagcagtttgggtcatgatgtttgtgatgtgcctgaccgtg
gtggcggtgaccgtgtttgtgtttgaatacttcagtccagttggctacaaccgcagtctg
gtgagcgctaaagctcctggtggtccgacgttcacaatagggaaatcggtgtggctgttg
tggggcatcgtcttcaacaactccgtccccatcgagaacccaaaaggaaccaccagtaaa
atcatggtactggtctgggccttcttcgccgtcatattcctggcttcctacactgccaac
ctcgccgctttcatgattcaggagcaatacatcgacacagtgtctggcctctcagacaag
aagttccagaaaccacaggagcattaccctccttttcgcttcgggacggtcccaaatggg
agcacagagaggaacatccgcagcaactatcctgacatgcacacacacatgatgaaatac
aatcagaagggggtggaagaggccctggagagcctgaaaaacgggaagctggatgccttc
atctatgatgctgcagttttgaactacatggccgggaaggacgaggggtgcaaactggtg
accattggcagtgggaaggtgtttgccaccaccggatatggcattgctctggaaaaagac
tcgcgctggaaacgacctattgacctggcattgctgcagtttctaggagatggagacact
gaacgtctggagaccgtctggttgtctggtatctgccagaatgagaaaaacgaagtgatg
agcagtaagttggacattgacaacatggcaggtgtcttctacatgcttctggtggctatg
ggcctcagcctgttggtgtttgcctgggagcacctgctctactggaaactacgacactct
ctccacaaatctcacaaacttgacttcctgttggccatcagtaggggtatttacagttgt
ttcaaaggagtagaggatcccggacgttcatctggtttggccaaacccgacctgacctcc
aactatgctcaagcaaacatgcttaagatgcttcgcactgccaaggacctggtctccact
gccaatgttgagagctctctggacaacgccacaaagaccatagagcatttaagtcgtcat
ggtgggaccttacctgttcgtgttccgcaagtttctacggaggccgtgccaggaggcttt
gcttatgttactgaaaaccactgctcccttcctcagcgctctcttaccccacctctatct
ggtgttacctctctgaaacaacagaggggtgtaaccaggccaacaccactgcgctacaca
cttccaacccgctcttcatcatgtctgtatgacagaccacttcctgtatccagcctgagc
accccccacctggctgtcggagagccgcttcctcatcagcacccataccactaccagacc
actgggaggctctatgttgactcccatcatcactcccctttcattccttactcagatctc
caactgccagacatctacgcgtcacatccggtttccttatcccaaaaccaacatgtccaa
gtggggttctcccaaccaaaacggaggtctaagagttttcagagtgacaatggggatata
gaaaggagaaaacatggggagcaggggaagaatgacaaaagtcccattggtctgagtgag
ctcaaggccaatcaccttcatgataatcatgtctccaccccaagtgttgacaacatttat
ttaggagaggggatgtgtcctcgggtagagaactacggctcctggcctccagaggacctt
gtgctgagagggcgacgcaggcaccgccgaccctcttttcttaaagcaacttggggtagt
gagcaaattcgtcagcttgatgaatcccaatcttctttgtccagccaatcaccgtcaacc
ttgcctgacctgtttccatgcgttgttactccaaccacatctgctaagccttacaatcct
gcccatcttcgaaacaacctgtgcctcccaaggaaccaggcctacctccacatcagggag
gaccaaaggaggcctaatgggcggaagggccagagactgcgctactcccactccacccac
ctcccaacatatggagaagcagtacgacatggaactgggccagggcgaggtatggtgcgg
agagccaccagcctgctcagccgtcagtacgcacactacctgaactcgtaccctggactc
cctctttaccatggtccactagatgtccagcatcacagccaggcttccagcccagtttgc
cagctgttggcctgtggtagtgggcgatgtggaggccagcgggcactgctgtaccaggac
agcttatatggagcttatgggttctatcagggatctcagactggatcagaagctccagta
gggcagggagtgggtagccatcctggggggagtccttgtgtacttagaccatggcgacga
gtttccagtttggaatcagaagtctga
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