Kosakonia sp. SMBL-WEM22: HF650_00670
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Entry
HF650_00670 CDS
T08549
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
kob
Kosakonia sp. SMBL-WEM22
Pathway
kob00540
Lipopolysaccharide biosynthesis
kob01100
Metabolic pathways
kob01250
Biosynthesis of nucleotide sugars
Module
kob_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
kob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HF650_00670 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kob01005
]
HF650_00670 (rfaD)
Enzymes [BR:
kob01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
HF650_00670 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
kob01005
]
Core region
HF650_00670 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
QNQ18399
UniProt:
A0A7H0M7Y8
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Position
complement(124635..125567)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLHIADYMDKEDFLIQI
MSGEEFGEIEAVFHEGACSSTTEWDGKYMMENNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKMLFDEYVRGILPEANSPIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDNFKRDFVYVGDVAAVNLWFWENGVSGIYNLGTGRA
ESFQAVADATLAFHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVS
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtcactggcggcgcgggttttatcggcagtaatatcgttaaagccctgaat
gacaaaggcatcaccgatatcctggtggtggacaacctgaaagacggcactaagtttgtc
aatctggtcgacttgcatatcgccgactatatggataaagaggattttctgatccagatt
atgtctggcgaagagttcggcgagatcgaagcggtattccacgaaggcgcgtgctcctct
accaccgagtgggatggcaagtacatgatggagaacaactatcagtactccaaagagctg
ctgcactactgcctggagcgtgaaattccgttcctgtatgcttcatccgcagccacctac
ggcggccgcacctcggactttattgaatcgcgcgaatatgaaaaaccgctcaatgtctac
ggctactcaaaaatgctgttcgatgagtatgtgcgcggcattctgccggaagcgaactcg
ccgattgtcggcttccgctatttcaacgtctatggcccgcgtgaagggcacaaaggcagc
atggcgagcgtcgctttccatctcaacacgcagttgaacaatggcgagagcccgaaactg
ttcgaaggcagcgacaactttaaacgcgatttcgtctacgtcggcgatgtggctgcggtc
aatctctggttctgggaaaacggcgtttccggtatttataacctcggtaccggccgcgcg
gagtccttccaggccgtggcggatgctacgctcgccttccacaaaaaaggcagcattgag
tacatcccgttccccgataagctgaaaggccgctatcaggcatttacgcaggccgatctt
actaacctgcgcgcggcgggctacgacaagccgtttaaaaccgtggccgaaggtgtaagc
gaatatatggcctggctaaaccgcgacgcgtaa
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