Kocuria sp. KD4: HBK84_04530
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Entry
HBK84_04530 CDS
T06521
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00860
Porphyrin metabolism
kod01100
Metabolic pathways
kod01110
Biosynthesis of secondary metabolites
kod01120
Microbial metabolism in diverse environments
kod01240
Biosynthesis of cofactors
Module
kod_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HBK84_04530 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kod04147
]
HBK84_04530 (hemB)
Enzymes [BR:
kod01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
HBK84_04530 (hemB)
Exosome [BR:
kod04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HBK84_04530 (hemB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
SH3_6
Motif
Other DBs
NCBI-ProteinID:
QIR69422
UniProt:
A0A6G9V1V5
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All DBs
Position
971382..972389
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AA seq
335 aa
AA seq
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MTDHDVSYDLVSRPRRLRSTPAMRRFTAETRVTPSELILPVFVKEGLDEPQPLASMPGVV
QHNMDSLKRAAAEAVELGLGGFMLFGIPQIRDAEGSAALDPDGILNRGIRAVRDEVGDDI
VVMSDLCLDEFTDHGHCGVLDDQGRVDNDRTLEIYGRMGLAQAEAGAHMLGPSGMMDGQV
GVIRAALDAAGREDVSILAYSAKYSSAFYGPFREAVDSTLTGDRKTYQMDPANRREALLE
LQLDLDEGADMVMVKPAMSYLDILREVADASPVPVSAYQISGEYAMIEAAAANGWINRDA
AIRESVLSIKRAGANSILTYYATELARWFHEENGR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccatgacgtgtcgtacgacctcgtgtcacggccccgcagactgcgcagtacc
ccggccatgcgccggttcaccgcggagacccgcgtgacgccgtccgagctgatcctgccc
gtgttcgtcaaggaaggactcgacgagccgcagcccctggcctcgatgcccggtgtggtg
cagcacaacatggactctctcaagcgcgcggccgccgaagccgtggagctggggctgggc
ggcttcatgttgttcgggatcccgcagatccgcgacgcagagggctccgccgcgctggac
ccggacggcatcctcaaccgcgggatccgtgccgtgcgtgacgaggtgggggacgacatc
gtggtcatgtcggacctgtgcctggacgagttcaccgatcacggccactgcggtgtgctg
gatgatcagggccgcgtggacaacgatcgcaccctggagatctacggccgcatgggcctg
gcccaggccgaggccggcgcccacatgctgggaccctccgggatgatggacggccaggtg
ggcgtgatccgcgcggcactggacgctgcgggccgcgaggacgtgtcgatcctcgcctac
agcgccaagtactcgtccgcgttctacggcccgttccgcgaggccgtggactccacgctc
acgggtgaccgcaaaacctatcagatggatcctgcgaaccgccgggaggccctgctggag
ctgcagctggacctggacgagggcgcggacatggtcatggtcaagccggccatgagctat
ctggacatcctgcgcgaggtcgcggacgcgtcccccgtgccggtctcggcgtaccagatc
tcgggtgagtacgcgatgatcgaggccgccgcggcgaacggctggatcaaccgcgacgcc
gcgatccgcgagtccgtgctgtccatcaagcgcgccggggccaactcgatcctgacctac
tacgcgaccgagctcgcccgctggttccatgaggagaacggcaggtaa
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