Kocuria sp. KD4: HBK84_09550
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Entry
HBK84_09550 CDS
T06521
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
kod
Kocuria sp. KD4
Pathway
kod00020
Citrate cycle (TCA cycle)
kod00190
Oxidative phosphorylation
kod00650
Butanoate metabolism
kod01100
Metabolic pathways
kod01110
Biosynthesis of secondary metabolites
kod01120
Microbial metabolism in diverse environments
kod01200
Carbon metabolism
Module
kod_M00009
Citrate cycle (TCA cycle, Krebs cycle)
kod_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
kod_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
kod00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HBK84_09550
00650 Butanoate metabolism
HBK84_09550
09102 Energy metabolism
00190 Oxidative phosphorylation
HBK84_09550
Enzymes [BR:
kod01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HBK84_09550
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_7
Fer4
Fer4_9
Fer4_2
Fer4_4
Fer4_18
Fer4_6
Fer4_3
Fer4_16
Fer4_20
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
QIR70245
UniProt:
A0A6G9V1Z4
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All DBs
Position
2121620..2122402
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AA seq
260 aa
AA seq
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MSTAATENQTQDAQKPGDKGEESIPTYDVVLKVRRYDPEFSSEAHWDEWNLTMYGTDRVL
DALHKVKWELDGSLSFRRSCAHGVCGSDAMRINGRNRLACKTLLKDLDLSKPILVEPIKG
LPCEKDLIVDMEPFFQSYREIMPFLVNEDHTPTGERFQSQEDRARFDDTTKCILCAACTS
SCPVFWTDGQYFGPAAIVNAHRFIFDSRDQAGDMRLEILNDKEGVWRCRTTFNCTEACPR
GIQVTKAIAEVKKAVFASAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgcagccaccgagaaccagacccaggacgcccagaaacccggcgacaagggc
gaggagtcgatccccacgtacgacgtggtgctcaaggtccgccgctatgatcccgagttc
agctccgaggcgcactgggatgagtggaacctgaccatgtacggcaccgaccgcgtgctg
gacgccctgcacaaggtcaagtgggagctggacggttccctgtccttccgccgctcgtgc
gcgcacggcgtgtgcggttcggacgccatgcgcatcaacggccgcaaccggctcgcgtgc
aagacccttctcaaggacctggacctgtccaagcccatcctcgtggagcccatcaagggc
ctcccgtgcgagaaggacctgatcgtggacatggaaccgttcttccagtcctaccgcgag
atcatgccgttcctggtgaacgaggaccacacccccaccggagaacgcttccagtcccag
gaggaccgcgcgcgcttcgacgacaccaccaagtgcatcctctgcgccgcgtgcacgtcc
tcgtgcccggtgttctggacggacgggcagtacttcggcccggccgcgatcgtcaacgcg
caccggttcatcttcgactcgcgtgaccaggccggtgacatgcgcctggagatcctcaac
gataaggaaggcgtgtggcgctgccgcaccaccttcaactgcaccgaggcgtgcccccgc
ggcatccaggtgaccaaggccatcgccgaggtcaagaaggcggtcttcgcctccgccttg
tga
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