Kosakonia oryzendophytica: O9K67_01055
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Entry
O9K67_01055 CDS
T08786
Symbol
hmsP
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
koo
Kosakonia oryzendophytica
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
O9K67_01055 (hmsP)
Enzymes [BR:
koo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
O9K67_01055 (hmsP)
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Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
CHASE8
ABC_membrane_2
T4_deiodinase
SAM_DrpA
Motif
Other DBs
NCBI-ProteinID:
WBT58425
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Position
243491..245497
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AA seq
668 aa
AA seq
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MRVSRSLTIKQMAAVSAVSMVFVFIFCVILLFHFLQQNRYNTAMQLESIARSVREPLSAA
ILKADIPDAESILQQIKPAGVVSRADVVLPNQFQALRMRFIPERPIPVMITRMFELPIQI
SLPIYSLERPANPQPLAYLVLQADSYRVYKFVISTLSTLVTAYLLLWLMLTVAISWCMNR
LLVHPLRKIARELNDLSAEDRLGHQLILPSHHHDDEIGILVRGYNRHQQQLLREYDALNQ
QSTQFPVSELPNKAFLMALLEQTVAQKKTTALMVIACDTLRDTAGVLQENQREMLLLTLV
EKLKSVLSPHMTLAQVSGNDFAIIANGVEEPWHAITLGQQVLTAINERIPLQGIQLRPTA
SIGVAMCHGDLSAEQLYRRAVSAASSARHKGKNQLQFFDPQHMALAQQRLALESDILSAL
EQGKFAIWLQPQVDLASGELKSAEVLLRMQQEDSRWALPEGLIERIESSGLMINVGYWVL
EESCRLLAAWQSRGIMLPLSVNLSALQLLHHNMASDMLELLHRYRIAPGTLILEITESRR
IDDPQAAVAILRPLRDAGVRIALDDFGMGYAGLRQLQHMKSLPVDVLKIDKTFVDGLPDD
NSLVSAIIHMARSLELEIIAEGVERENQRDWLAQAGVDVAQGFLFAHASSPEAFEQRWFT
GSDMTENR
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgttagccgttctttaaccattaaacagatggctgcggtgtctgccgtgtccatg
gtgtttgtttttattttttgcgtcattctgctgtttcacttcttacagcagaatcgctat
aacacggccatgcaactggaaagtattgcccgctctgttcgagaaccgctctcggcagcg
attctgaaagccgatattcctgacgcggaatctatcttgcagcaaattaaacctgccggg
gtggtgagccgggcggacgtcgtgctgcccaatcaatttcaggcgctgcggatgcgcttt
attccggaacgcccaatcccggtgatgatcacccggatgtttgaattaccgatccagatc
tcgctgccgatttattcgctggagcgcccggccaaccctcagccactggcttacctggtg
ttgcaggcggattcgtaccgtgtctataaattcgttatcagcacactgtctacgttagtg
actgcttacttactgctttggctcatgctgaccgtcgcgatttcctggtgcatgaatcgg
ttactggtacacccgctgcggaaaatcgcccgtgagttaaatgatctctcagcagaggat
cgccttgggcatcagttgattttgccttcccatcaccatgacgatgaaataggcatcctg
gtgcgtggctataaccggcatcaacagcaattgctgcgggaatatgatgcgttaaatcag
caatccacgcagttcccggtgtctgaattgccgaacaaggcttttctgatggcgttgctg
gagcagacggttgcgcagaaaaagaccacagcgctgatggtgattgcctgcgacacgctg
cgcgatacggcgggcgtattgcaggaaaatcagcgagaaatgctgctgctgacgctggta
gagaagctgaagtcggtgctgtcaccgcacatgacgcttgcgcaggtcagcggtaatgac
ttcgcgattattgccaacggcgtagaggagccgtggcatgctatcactttaggtcagcaa
gtactcactgcgattaacgagcggattccgcttcaggggatccagttacgcccgacagcc
agtatcggcgtggcgatgtgtcatggcgatctttccgctgagcagctttaccgccgcgcg
gtatccgcagccagcagtgcgcggcacaaagggaaaaaccagctccagttcttcgatccg
caacacatggcgctggcgcagcagcgtctggcccttgaaagcgatattctctctgcgctt
gagcagggaaaatttgcgatttggctgcaaccgcaggtggatcttgccagcggtgaactt
aaaagcgcagaagtgttgctgcgtatgcagcaagaggactctcgctgggcgttgccggaa
ggtctgattgaacgtatcgaatccagtgggttgatgatcaacgtgggttactgggtgctg
gaagagtcctgtcgcttactggcggcatggcagtcgcgggggattatgctgccgctgtcg
gtcaatctttccgccttgcaacttcttcatcacaatatggcgtccgatatgcttgaactg
ctgcatcgctaccgtatcgcacccggtacgctgatcctggaaatcacggagagtcgccgt
attgatgatccgcaagccgcggtggcgatcctacgcccgttgcgcgacgccggggttcgc
attgcgctggacgacttcggtatgggttatgccgggttacgtcagttacaacatatgaaa
tcgctgcctgtggatgtgctgaaaatcgacaagacatttgttgacgggttaccggatgac
aacagcctggtatcggccattatccatatggcgcgcagcctcgagctggagattattgct
gaaggggtggagcgggaaaatcagcgcgactggctggcgcaagcgggcgtagatgtggcg
caaggcttcctttttgcccatgcctcgtcaccagaggcgtttgaacagcgttggtttacc
ggttcggatatgactgaaaatcgttaa
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