Kosakonia oryzendophytica: O9K67_23445
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Entry
O9K67_23445 CDS
T08786
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
koo
Kosakonia oryzendophytica
Pathway
koo00071
Fatty acid degradation
koo00280
Valine, leucine and isoleucine degradation
koo00310
Lysine degradation
koo00362
Benzoate degradation
koo00380
Tryptophan metabolism
koo00410
beta-Alanine metabolism
koo00640
Propanoate metabolism
koo00650
Butanoate metabolism
koo00907
Pinene, camphor and geraniol degradation
koo00930
Caprolactam degradation
koo01100
Metabolic pathways
koo01110
Biosynthesis of secondary metabolites
koo01120
Microbial metabolism in diverse environments
koo01200
Carbon metabolism
koo01212
Fatty acid metabolism
Module
koo_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
koo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
O9K67_23445 (fadB)
00650 Butanoate metabolism
O9K67_23445 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
O9K67_23445 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
O9K67_23445 (fadB)
00310 Lysine degradation
O9K67_23445 (fadB)
00380 Tryptophan metabolism
O9K67_23445 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
O9K67_23445 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
O9K67_23445 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
O9K67_23445 (fadB)
00930 Caprolactam degradation
O9K67_23445 (fadB)
Enzymes [BR:
koo01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
O9K67_23445 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
O9K67_23445 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
O9K67_23445 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
O9K67_23445 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WBT58020
LinkDB
All DBs
Position
4871374..4873563
Genome browser
AA seq
729 aa
AA seq
DB search
MLYKGNNLYLNWLEDGIAELVFDAPGSVNKLDTATVASLGEALDVLEKQSDLKGLLLRSE
KAAFIVGADITEFLSLFLVPAEQLSQWLHFANSVFNRLEDLPVPTLSAVNGYALGGGCEC
VLATDYRLATPDLRIGLPETKLGIMPGFGGSVRMPRLLGADSALEIIAAGKDVGAEEALK
IGLVDGIVKPEKLRDGAVAILRQAMKGDLDWRAKRQPKLEPLKLSKIEAAMSFTIAKGMV
MQTAGKHYPAPITAVKTIEAAAKFGRDEALKLENQSFVPLAHTNEARALVGIFLNDQYVK
GQAKKLTKNVETPKQAAVLGAGIMGGGIAYQSAWKGVPVLMKDINEKSLALGMSEAGKLL
NKQLERGKIDGLKLAGVISTIQPTLAYAGFERADVVVEAVVENPKVKKAVLAETEDQVRP
DTVLASNTSTIPISELASVLKRPENFCGMHFFNPVHRMPLVEVIRGEKTSDETIAKVVAW
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSQLLRDGADFRKVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPQRMQKDYRDAIDALFDANRYGQKNGIGFWRYKEDSKGKP
KKEEDAAVDNLLAEISKGRQDFSDDDTIARMMIPMVNEVVRCLEEGIIASPAEADMALVY
GLGFPPFHGGAFRWLDTIGSAKYLDMAQQYQHLGPLYEVPAGLREKARHNEPYYPEVEPA
RPVGELKTA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctacaaaggcaataacctgtacctcaactggctggaagatggcatcgccgaactg
gtgttcgatgctcccggttcagtgaataagcttgatactgctaccgtcgccagcctcggt
gaggcgctggacgtgttggaaaagcaatcagatttaaaagggctgctgctgcgttccgaa
aaagcggcctttatcgttggcgcggatatcaccgaattcctttcgctgtttctggtgccg
gcagagcaattgagccagtggctacattttgcaaacagcgtctttaaccgactggaagat
ttgccggtacctacgctttctgccgtcaatggctatgcgttgggcggcggctgcgaatgc
gtgctggcgactgactatcgcctggcgacgccggacctgcgcatcgggctgccggaaacc
aaactgggtatcatgccgggctttggcggttccgtgcgtatgccgcgcctgcttggtgca
gatagcgcattagaaattattgctgccgggaaagatgtcggtgccgaagaggcactgaaa
attggcctggtagatggcattgtgaagccggaaaaactgcgtgatggtgcagtagccatc
ctgcgccaggcgatgaagggcgatctcgactggcgagccaaacgtcagccgaagctggaa
ccgctgaaactcagcaaaattgaagccgccatgagctttaccattgccaaaggcatggtg
atgcaaaccgctggcaaacactatccggcacccattacggcggtaaaaaccattgaagcc
gctgcaaaattcggtcgtgatgaggctctgaagctggaaaatcagagcttcgttccgctg
gcccataccaacgaagcccgtgcactggtcggtattttccttaatgaccaatacgttaaa
gggcaggcgaagaaactgaccaaaaatgtagaaacgcccaaacaggctgcggtacttggt
gcaggcatcatgggcggtggcattgcctatcagtccgcgtggaaaggcgtgccggtgttg
atgaaagatatcaatgagaagtcgctcgcgctcggcatgagcgaggcgggtaaattgctg
aataaacagcttgagcgcggcaagatcgacggtctgaagctggccggtgtgatttccacc
atccagcccacgctggcctatgctggttttgagcgtgccgatgtggtggtggaagcggtt
gttgaaaacccgaaagtgaaaaaagcggtattagcagaaactgaagaccaggtgcgcccg
gataccgtgctggcgtcaaacacctccactattcccatcagtgaactggcaagtgtgcta
aaacgcccggaaaacttctgcggtatgcacttctttaacccggtgcaccgcatgccgctg
gtcgaggtgatccgcggtgaaaaaacctccgatgagaccatcgcaaaagtggtggcatgg
gccagtaaaatgggcaaaaccccgattgtggtcaatgactgccccggtttctttgttaac
cgtgtgctgttcccctatttcgccggttttagccagttgctgcgcgacggcgcggacttc
cgcaaagtcgacaaagtgatggaaaaacagttcggctggccgatgggcccggcctatctg
ctagacgttgtgggtattgataccgcgcatcacgcccaggcggtgatggcggccggtttc
ccgcagcgtatgcagaaagattaccgcgatgcgatcgatgcgctgtttgacgccaaccgc
tacgggcagaaaaacggcatcggcttctggcgctataaagaagacagcaaaggcaagccg
aagaaagaagaagatgccgcagtggataacctgctggcggagatcagcaaaggccgacag
gatttcagcgacgacgacactatcgcccgcatgatgatcccgatggtgaatgaagtggtg
cgctgcctcgaagagggcattatcgccagccctgccgaagccgacatggcgctggtgtat
gggcttggtttcccgccgttccatggtggcgcgttccgctggctggatacgatcggcagc
gcaaaatatctcgacatggcgcagcagtatcagcacctcgggccgttgtatgaggtcccg
gcagggctgcgtgaaaaagcacgccataacgagccttattaccccgaagttgaacctgcg
cgcccggtgggcgagctgaagacggcttaa
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