Kordiimonas sp. SCSIO 12610: KFF44_14855
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Entry
KFF44_14855 CDS
T08324
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
koz
Kordiimonas sp. SCSIO 12610
Brite
KEGG Orthology (KO) [BR:
koz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
koz03009
]
KFF44_14855 (rimO)
Enzymes [BR:
koz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
KFF44_14855 (rimO)
Ribosome biogenesis [BR:
koz03009
]
Prokaryotic type
ribosomal protein modification factors
KFF44_14855 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UTW55066
LinkDB
All DBs
Position
3239038..3240408
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AA seq
456 aa
AA seq
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MNTEDTHTSPHQSSKVGFVSLGCPKALVDSERILTQLRSEGYEISPDYAGADVVVVNTCG
FIDSAKEESLGAIKEAMVENGKVIVTGCLGVEEGKIREVAPDVLAISGPHQYETVVNQVH
EHAPQPHDPFAHLVPPGGLKLTPRHYAYLKISEGCNHSCKFCIIPSFRGKLKSRPVRAVL
REAEKLVEAGVQELLVISQDTSAYGLDLKHAPEPWKDNEVRAHMTDLANALGDMDVWVRL
HYVYPYPHVDEVIALMAEGIILPYLDIPFQHASPKVLKAMRRPANEHKVLERIHRWREQV
PEIVIRSTFIVGFPGETEEDFEYLLDWLEEAQLDRVGCFKYEPVKGAAANELPDQVPEDV
KQERWERFMAVSQKISANKLKQRVGMEMAVIIDEVTDEGVVGRTYADAPEIDGQVHLTGA
IECIPGTMVMAHIDDSDEYDLYGHIVVDEDDDDWDW
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaatacagaggatacacatacatcaccccaccaatcctcaaaggttggtttcgtctca
ttaggttgcccaaaggcacttgtggatagcgaacgcattttgacgcaactgcgctcagaa
gggtatgaaatatcacccgactatgcaggcgctgatgtggtggttgtgaatacctgtggc
tttatcgatagcgccaaggaagaaagcctgggtgcaatcaaggaagcgatggttgaaaac
ggcaaggttattgtaacgggttgcctaggtgtcgaagaaggcaaaatccgggaggtcgcc
cctgacgtgcttgcgatctctggcccacaccaatatgaaaccgtggttaatcaggtgcat
gagcacgcaccccagccccatgatccattcgcgcaccttgtaccgcccggcggccttaag
ctgacaccgcgccattatgcctatctgaagatttcggagggttgtaaccattcgtgtaaa
ttctgtattatcccatcgtttcgcgggaagttaaaatcgcgccccgtgcgcgcggtactc
cgtgaagctgaaaagcttgtagaagcgggcgttcaggagcttttggttatctcccaggat
acttctgcgtatggccttgacctcaagcacgcaccagaaccctggaaagacaatgaggtt
cgcgctcacatgacggaccttgcgaacgcgcttggtgatatggatgtttgggtgcgcctt
cattatgtgtatccctacccacatgtggacgaggtgattgccttaatggcggaaggaata
atccttccgtacctcgatatcccgtttcagcatgcgtcaccaaaagtcctaaaggcaatg
cgccgcccggcgaatgagcataaggtattggaacgcatccatcggtggcgcgaacaagtg
ccggaaatcgttattcgttccacctttatcgttggctttcccggcgaaacagaagaggat
tttgagtatcttctggattggttagaggaagcgcaactggaccgcgttggctgtttcaag
tacgagcccgttaagggggctgctgccaacgagttaccggaccaggtgcccgaagatgtc
aagcaagagcgctgggaacgttttatggcggttagtcagaaaatttccgcgaacaaatta
aagcagcgtgtcggcatggaaatggctgttatcatcgatgaagtcacagatgaaggcgtc
gtcgggcgaacctatgccgacgcacccgaaatcgatgggcaagttcacctcacgggcgca
atcgaatgcattcccggcacgatggttatggcgcatatcgatgatagcgacgagtatgac
ctatatggccatatcgtggttgatgaagatgatgacgactgggattggtag
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