Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1: VK055_3508
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Entry
VK055_3508 CDS
T03418
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
kpt
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Pathway
kpt00540
Lipopolysaccharide biosynthesis
kpt01100
Metabolic pathways
kpt01250
Biosynthesis of nucleotide sugars
Module
kpt_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
kpt00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VK055_3508 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kpt01005
]
VK055_3508 (rfaD)
Enzymes [BR:
kpt01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
VK055_3508 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
kpt01005
]
Core region
VK055_3508 (rfaD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AIK82064
UniProt:
A0A1Y0PR94
LinkDB
All DBs
Position
complement(3601833..3602765)
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AA seq
310 aa
AA seq
DB search
MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLNIADYMDKEDFLIQI
MAGEEFGEIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEQPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNNGESPKLFEGSDGFKRDFVYVGDVADVNLWFWENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGSIEYIPFPDKLKGRYQAFTQADLTNLRKAGYDKPFKTVAEGVT
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcaggctttatcggcagcaacatcgttaaagcgctgaat
gacaaaggcatcaccgacattctggttgtcgacaatctgaaagacggcaccaagtttgta
aacctggttgacctgaacatcgctgactacatggataaagaagactttctgatccagatt
atggcgggtgaagagttcggtgaaatcgaagcaatcttccacgaaggcgcgtgctcttcc
actaccgagtgggatggcaagtacatgatggacaacaactatcagtactccaaagagctg
ctgcactactgcctggagcgcgaaatcccgttcctgtacgcctcctccgcggccacctat
ggcggacgcaccagcgacttcatcgagtcccgcgagtacgaacagccgctgaacgtttac
ggctactccaaattcctgttcgacgaatacgtccgccagatcctgccggaagccaattcg
cagatcgtcggcttccgctactttaacgtctacgggccgcgcgaaggccacaaaggcagc
atggcgagcgtcgctttccacctcaatacccagctgaataatggcgaaagcccgaaactg
tttgaaggcagcgacggcttcaagcgcgacttcgtctacgtgggcgacgtggctgacgtc
aacctgtggttctgggaaaacggcgtttccggcatcttcaacctcggcaccggccgtgcg
gaatccttccaggccgtcgccgatgcgaccctggcataccacaaaaaaggcagcatcgag
tacatcccgttcccggacaaactgaaaggccgctaccaggcgttcacacaggcggatctg
actaacctgcgcaaagcgggctatgacaaaccgttcaaaaccgttgccgaaggcgtaacg
gaatatatggcctggctaaaccgcgacgcgtaa
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